RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 TLE3Q04726 772 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 NOGQ13253 232 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 SELPLGQ14242 412 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 PHF19Q5T6S3 580 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 CD163Q86VB7 1156 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 KLHDC8AQ8IYD2 350 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 ZNF440Q8IYI8 595 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 SFXN5Q8TD22 340 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 THAP3Q8WTV1 239 aaPredicted RBP11.66□□□□□ -0.54
CLCN4-203ENST00000421085 UHRF1Q96T88 793 aaPredicted RBP11.66□□□□□ -0.54
CLCN4-203ENST00000421085 PRRT1Q99946 306 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 GABRPO00591 440 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 MED6O75586 246 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 DEFB115Q30KQ5 88 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 ESCO2Q56NI9 601 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 RNF111Q6ZNA4 994 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 Q6ZPB1 254 aaPredicted RBP11.66□□□□□ -0.54
CLCN4-203ENST00000421085 SIAH1Q8IUQ4 282 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 OR2M4Q96R27 311 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 PIGBOS1A0A0B4J2F0 54 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 A6NL46 340 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 RFXAPO00287 272 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 CLEC3AO75596 197 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 ARSBP15848 533 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 RPS15AP62244 130 aaKnown RBP11.66□□□□□ -0.54
CLCN4-203ENST00000421085 PGM2L1Q6PCE3 622 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 ERN2Q76MJ5 926 aaKnown RBP11.66□□□□□ -0.54
CLCN4-203ENST00000421085 SPRED1Q7Z699 444 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 ENTHD1Q8IYW4 607 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 TMEM130Q8N3G9 435 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 FNDC9Q8TBE3 224 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 ST7LQ8TDW4 575 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 MED30Q96HR3 178 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 OR1F2PQ96R84 312 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 TSPAN10Q9H1Z9 355 aaPredicted RBP11.66□□□□□ -0.54
CLCN4-203ENST00000421085 SRPX2O60687 465 aaPredicted RBP11.66□□□□□ -0.54
CLCN4-203ENST00000421085 ALDOCP09972 364 aaKnown RBP11.66□□□□□ -0.54
CLCN4-203ENST00000421085 HLA-DMAP28067 261 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 WNT7BP56706 349 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 HNRNPKP61978 463 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLCN4-203ENST00000421085 EIF2B1Q14232 305 aaKnown RBP11.66□□□□□ -0.54
CLCN4-203ENST00000421085 TGM7Q96PF1 710 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 HAPLN2Q9GZV7 340 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 PLCXD1Q9NUJ7 323 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 ARHGAP33O14559 1287 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 PDGFAP04085 211 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 AFF3P51826 1226 aaKnown RBP11.66□□□□□ -0.54
CLCN4-203ENST00000421085 GPR50Q13585 617 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 C18orf63Q68DL7 685 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 TSSK4Q6SA08 328 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 CBLL1Q75N03 491 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 PDZD3Q86UT5 571 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 DNAJC22Q8N4W6 341 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 TMEM163Q8TC26 289 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 SLC38A1Q9H2H9 487 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 TCEAL2Q9H3H9 227 aaPredicted RBP11.66□□□□□ -0.54
CLCN4-203ENST00000421085 RETREG1Q9H6L5 497 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 IER3IP1Q9Y5U9 82 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 CCDC163A0A0D9SF12 145 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 A0A1W2PS29 197 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 VEGFDO43915 354 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 HTR3BO95264 441 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 RRAS2P62070 204 aaPredicted RBP11.65□□□□□ -0.54
CLCN4-203ENST00000421085 MAMDC2Q7Z304 686 aaPredicted RBP11.65□□□□□ -0.54
CLCN4-203ENST00000421085 ADAMTS14Q8WXS8 1223 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 IRF7Q92985 503 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 C19orf25Q9UFG5 118 aaPredicted RBP11.65□□□□□ -0.54
CLCN4-203ENST00000421085 NME7Q9Y5B8 376 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 SPO11Q9Y5K1 396 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 J3KTA2 159 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 OR7A17O14581 309 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 CXADRP78310 365 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 PRKCZQ05513 592 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 DCST2Q5T1A1 773 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 OR2G6Q5TZ20 316 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 FRMPD2BQ6IN97 320 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 METAP1DQ6UB28 335 aaPredicted RBP11.65□□□□□ -0.54
CLCN4-203ENST00000421085 AVL9Q8NBF6 648 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 ACPTQ9BZG2 426 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 PPP4R1LQ9P1A2 415 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 USP36Q9P275 1121 aaKnown RBP11.65□□□□□ -0.54
CLCN4-203ENST00000421085 TESQ9UGI8 421 aaKnown RBP11.65□□□□□ -0.54
CLCN4-203ENST00000421085 USP22Q9UPT9 525 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 GAPDHSO14556 408 aaPredicted RBP11.65□□□□□ -0.54
CLCN4-203ENST00000421085 FZD7O75084 574 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 CCINQ13939 588 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 MEF2DQ14814 521 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 MRPL41Q8IXM3 137 aaKnown RBP11.65□□□□□ -0.54
CLCN4-203ENST00000421085 ZNF454Q8N9F8 522 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 BBS1Q8NFJ9 593 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 TEPSINQ96N21 525 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 LDAHQ9H6V9 325 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 PTTG3PQ9NZH4 202 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 OSGIN1Q9UJX0 560 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 HLA-AP01891 365 aaKnown RBP11.65□□□□□ -0.54
CLCN4-203ENST00000421085 TSTD1Q8NFU3 115 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 OR4F15Q8NGB8 312 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 GPR150Q8NGU9 434 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 NPRL2Q8WTW4 380 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 ZNF587Q96SQ5 575 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms