RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 PRRC2AP48634 2157 aaKnown RBP8.51□□□□□ -1.05
NUP50-205ENST00000419387 ALG1L2C9J202 215 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 H3BML4 177 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 CASKO14936 926 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 RGS16O15492 202 aaPredicted RBP8.5□□□□□ -1.05
NUP50-205ENST00000419387 SEC14L5O43304 696 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 EMC8O43402 210 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 SMNDC1O75940 238 aaKnown RBP eCLIP8.5□□□□□ -1.05
NUP50-205ENST00000419387 RAF1P04049 648 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 HRGP04196 525 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 CHRNGP07510 517 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 DHRS4L1P0CG22 281 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 BCKDHAP12694 445 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 DDX5P17844 614 aaKnown RBP8.5□□□□□ -1.05
NUP50-205ENST00000419387 KIR2DL2P43627 348 aaPredicted RBP8.5□□□□□ -1.05
NUP50-205ENST00000419387 ASMTP46597 345 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 PCYT1AP49585 367 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 CLDN20P56880 219 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 RPS3AP61247 264 aaKnown RBP8.5□□□□□ -1.05
NUP50-205ENST00000419387 OCRLQ01968 901 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 FAM27E3Q08E93 113 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 TMEM44Q2T9K0 475 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 ARL13AQ5H913 290 aaPredicted RBP8.5□□□□□ -1.05
NUP50-205ENST00000419387 VWA1Q6PCB0 445 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 ZCCHC12Q6PEW1 402 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 PAMR1Q6UXH9 720 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 LIAT1Q6ZQX7 453 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 BTLAQ7Z6A9 289 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 TGIF2LYQ8IUE0 185 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 DDIASQ8IXT1 998 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 CNEP1R1Q8N9A8 125 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 SLC16A11Q8NCK7 471 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 OR4C3Q8NH37 302 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 TWIST2Q8WVJ9 160 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 MBD6Q96DN6 1003 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 PPP3R2Q96LZ3 170 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 FAM111AQ96PZ2 611 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 ALPK1Q96QP1 1244 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 MECRQ9BV79 373 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 PINK1Q9BXM7 581 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 HHATLQ9HCP6 504 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 SSU72Q9NP77 194 aaKnown RBP8.5□□□□□ -1.05
NUP50-205ENST00000419387 STOML1Q9UBI4 398 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 ACTL7BQ9Y614 415 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 AP4B1Q9Y6B7 739 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 CELSR1Q9NYQ6 3014 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 MED12LQ86YW9 2145 aa8.5□□□□□ -1.05
NUP50-205ENST00000419387 AKAP6Q13023 2319 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 A0A087WZY1 265 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 A0A1W2PRB8 838 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 TMEM114B3SHH9 223 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 TMEM233B4DJY2 109 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 PIP5K1BO14986 540 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 NDUFB5O43674 189 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 GMFGO60234 142 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 PEX11AO75192 247 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 KCNK2O95069 426 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 ATE1O95260 518 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 OXSR1O95747 527 aaPredicted RBP8.49□□□□□ -1.05
NUP50-205ENST00000419387 NGFRP08138 427 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 ALOX5P09917 674 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 ACP2P11117 423 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 TBXA2RP21731 343 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 MAPK1P28482 360 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 LCN1P31025 176 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 CPOXP36551 454 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 RPL3P39023 403 aaKnown RBP8.49□□□□□ -1.05
NUP50-205ENST00000419387 CD79BP40259 229 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 WDR4P57081 412 aaKnown RBP8.49□□□□□ -1.05
NUP50-205ENST00000419387 PPP2R2AP63151 447 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 SIRPAP78324 504 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 KEAP1Q14145 624 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 MLC1Q15049 377 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 PON3Q15166 354 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 POU4F3Q15319 338 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 SGCBQ16585 318 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 DUSP5Q16690 384 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.49□□□□□ -1.05
NUP50-205ENST00000419387 MFSD12Q6NUT3 480 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 FIGNL1Q6PIW4 674 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 ZNF474Q6S9Z5 364 aaPredicted RBP8.49□□□□□ -1.05
NUP50-205ENST00000419387 SZRD1Q7Z422 152 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 GALNT10Q86SR1 603 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 METTL25Q8N6Q8 603 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 FBXO30Q8TB52 745 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 FNDC9Q8TBE3 224 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 SMPDL3BQ92485 455 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 C16orf58Q96GQ5 468 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 ZNF845Q96IR2 970 aaPredicted RBP8.49□□□□□ -1.05
NUP50-205ENST00000419387 MS4A4EQ96PG1 132 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 C20orf27Q9GZN8 174 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 VIPAS39Q9H9C1 493 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 RNF122Q9H9V4 155 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 ELOVL5Q9NYP7 299 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 ATP6V1HQ9UI12 483 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 EIF3LQ9Y262 564 aaKnown RBP8.49□□□□□ -1.05
NUP50-205ENST00000419387 VDAC3Q9Y277 283 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 ZNF175Q9Y473 711 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 PCNX3Q9H6A9 2034 aa8.49□□□□□ -1.05
NUP50-205ENST00000419387 SHISA8B8ZZ34 492 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms