RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 RUFY1Q96T51 708 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 KAT8Q9H7Z6 458 aaKnown RBP2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 UTP6Q9NYH9 597 aaKnown RBP2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 ONECUT1Q9UBC0 465 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 SPRR3Q9UBC9 169 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 SH3BGRL2Q9UJC5 107 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 PLA2G4CQ9UP65 541 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 ARHGAP23Q9P227 1491 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 CDC42BPBQ9Y5S2 1711 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 ARID1AO14497 2285 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 CASKO14936 926 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 MDKP21741 143 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 CAMLGP49069 296 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 ARFIP1P53367 373 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 EIF4EBP2Q13542 120 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 SNX1Q13596 522 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 PDIA5Q14554 519 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 CDKN3Q16667 212 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 TMEM179BQ7Z7N9 219 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 LCA5Q86VQ0 697 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 SERPINA9Q86WD7 417 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 OR2T33Q8NG76 320 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 SLC13A3Q8WWT9 602 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 TMEM186Q96B77 213 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 SPXQ9BT56 116 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 C1orf21Q9H246 121 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 HSD3B7Q9H2F3 369 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 OR51J1Q9H342 316 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 TRPV5Q9NQA5 729 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 DCAF16Q9NXF7 216 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 ACTR3BQ9P1U1 418 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 ANKMY1Q9P2S6 941 aa2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 PIN4Q9Y237 131 aaKnown RBP2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 SPAG9O60271 1321 aaKnown RBP2.87□□□□□ -1.95
HMGB1P49-201ENST00000418882 COL4A4P53420 1690 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 ARHGAP42A6NI28 874 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 PDXKO00764 312 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 HMMRO75330 724 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 GPX5O75715 221 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 HOXC4P09017 264 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 NUMBP49757 651 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 OTUD4Q01804 1114 aaKnown RBP2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 TAF7Q15545 349 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 TEX44Q53QW1 395 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 PVRIGQ6DKI7 326 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 HSD17B13Q7Z5P4 300 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 TBC1D21Q8IYX1 336 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 BBS1Q8NFJ9 593 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 MARC2Q969Z3 335 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 ELSPBP1Q96BH3 223 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 WRAP53Q9BUR4 548 aaKnown RBP2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 TMEM231Q9H6L2 316 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 ANO10Q9NW15 660 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 TAS2R3Q9NYW6 316 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 IL19Q9UHD0 177 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 RRP15Q9Y3B9 282 aaKnown RBP2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 PPIAL4AQ9Y536 164 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 ARHGAP21Q5T5U3 1957 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 NOTCH2Q04721 2471 aa2.86□□□□□ -1.95
HMGB1P49-201ENST00000418882 H3BTX0 84 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 EFNA2O43921 213 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 IFNB1P01574 187 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 SEMG1P04279 462 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 ALPPP05187 535 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 STSP08842 583 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 ALPPL2P10696 532 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 CCNA2P20248 432 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 RPA1P27694 616 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 ADORA2BP29275 332 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 SLC26A2P50443 739 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 SLC26A5P58743 744 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 RND3P61587 244 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 HTD2P86397 168 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 VLDLRP98155 873 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 PDK1Q15118 436 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 ANKDD1AQ495B1 522 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 LDLRAP1Q5SW96 308 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 OLFM4Q6UX06 510 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 HSD11B1LQ7Z5J1 315 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 C17orf82Q86X59 251 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 RNF148Q8N7C7 305 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 OR2A12Q8NGT7 310 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 ZNF606Q8WXB4 792 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 N4BP2L2Q92802 583 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 MRPL38Q96DV4 380 aaKnown RBP2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 NSMCE2Q96MF7 247 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 KRT23Q9C075 422 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 SLC25A51Q9H1U9 297 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 PTGES2Q9H7Z7 377 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 C1orf123Q9NWV4 160 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 CGNQ9P2M7 1197 aaKnown RBP2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 SPASTQ9UBP0 616 aa2.85□□□□□ -1.95
HMGB1P49-201ENST00000418882 PINLYPA6NC86 204 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 TUBAL3A6NHL2 446 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 LRRC30A6NM36 301 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 DHRS7CA6NNS2 312 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 WASHC1A8K0Z3 465 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 WASH3PC4AMC7 463 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 LYPLA1O75608 230 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms