RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 COL11A1P12107 1806 aaPredicted RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 KIF26BQ2KJY2 2108 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 MN1Q10571 1320 aaPredicted RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 CROCCQ5TZA2 2017 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 PTPRFP10586 1907 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 CNTNAP1P78357 1384 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 IGKV6-21A0A0C4DH24 114 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 C1orf232A0A0U1RR37 186 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 LOC101059948A0A1B0GTJ6 334 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 A0A1W2PPQ1 181 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 A0A1W2PPW3 197 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 TMEM150BA6NC51 233 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 PRORSD1PA6NEY8 169 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 URADA6NGE7 173 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ANKRD61A6NGH8 418 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 CENPBD1B2RD01 187 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SDHDO14521 159 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 CITO14578 2027 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ANGPT2O15123 496 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ARPC2O15144 300 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ATP6V0E1O15342 81 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 AQP9O43315 295 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 MGAMO43451 1857 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SOCS5O75159 536 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ANXA9O76027 345 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SLCO2B1O94956 709 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 CELF2O95319 508 aaKnown RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 C22orf31O95567 290 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 PLGP00747 810 aaPredicted RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 IGHV2-70P01814 119 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 EDN1P05305 212 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 CHRNGP07510 517 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 CCDC159P0C7I6 412 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 FRMD6-AS1P0C7T7 363 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 PATE4P0C8F1 98 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 GSTT2P0CG29 244 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 GSTT2BP0CG30 244 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SLC35E2BP0CK96 405 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 GFAPP14136 432 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ITIH1P19827 911 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 TCN1P20061 433 aaPredicted RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 EEF1B2P24534 225 aaKnown RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 MPZP25189 248 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 PSMB4P28070 264 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 HTR1EP28566 365 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 CD40LGP29965 261 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SERPINB1P30740 379 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 RFC2P35250 354 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 TNFSF9P41273 254 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 RPS9P46781 194 aaKnown RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 GLIPR1P48060 266 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 GSSP48637 474 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 KRT6CP48668 564 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 RPL34P49207 117 aaKnown RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 ALDH3A2P51648 485 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 BMXP51813 675 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SLC7A2P52569 658 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 NAGLUP54802 743 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ARPC4P59998 168 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 RAB10P61026 200 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ADARB1P78563 741 aaKnown RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 RBP5P82980 135 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 MAT1AQ00266 395 aaKnown RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 GBE1Q04446 702 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 RBPJQ06330 500 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 BST2Q10589 180 aaKnown RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 GPR17Q13304 367 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 PMS2P3Q13401 168 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ITGA7Q13683 1181 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 GK3PQ14409 553 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 RBM39Q14498 530 aaKnown RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 SPCS2Q15005 226 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 DGUOKQ16854 277 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 CDO1Q16878 200 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ODF4Q2M2E3 257 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SHROOM1Q2M3G4 852 aaPredicted RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 ZNF181Q2M3W8 571 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 GOLGA7BQ2TAP0 167 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ITPRIPL2Q3MIP1 535 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ZNF876PQ49A33 203 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 GTDC1Q4AE62 458 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 AGKQ53H12 422 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SYT14P1Q58G82 188 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 FGD3Q5JSP0 725 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 OTUD3Q5T2D3 398 aaPredicted RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 ATAD3BQ5T9A4 648 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 GPR107Q5VW38 600 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 NANOGP8Q6NSW7 305 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 TMEM26Q6ZUK4 368 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 PRSS48Q7RTY5 328 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 PID1Q7Z2X4 250 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 NUP54Q7Z3B4 507 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SPATA19Q7Z5L4 167 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 CMC1Q7Z7K0 106 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 MAML2Q8IZL2 1156 aaPredicted RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 C8orf59Q8N0T1 100 aaPredicted RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 LSMEM2Q8N112 164 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SVOPLQ8N434 492 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms