RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 RFPL1O75677 317 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 IFNA4P05014 189 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 HNRNPA1L2Q32P51 320 aaKnown RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 RBM12BQ8IXT5 1001 aaKnown RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 OR52R1Q8NGF1 315 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 OR5D16Q8NGK9 328 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 OR8J1Q8NGP2 316 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 RTP3Q9BQQ7 232 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 GCM1Q9NP62 436 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 TAS2R8Q9NYW2 309 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 UBQLN2Q9UHD9 624 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 ANKRD33BA6NCL7 494 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 EEF1E1-BLOC1S5C9J1V9 151 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 LRRTM2O43300 516 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 AMY2AP04746 511 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 RAB3AP20336 220 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 ERP29P30040 261 aaKnown RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF136P52737 540 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 ACTBP60709 375 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 ACTG1P63261 375 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 SCGB2A2Q13296 93 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 NKPD1Q17RQ9 610 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 CDRT4Q8N9R6 151 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 OR1J4Q8NGS1 313 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 POLHQ9Y253 713 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 FOXE1O00358 373 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 RAB3BP20337 219 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 RAB4AP20338 218 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 FDXRP22570 491 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 RNASE10Q5GAN6 216 aaKnown RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 TOMM40LQ969M1 308 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 TMEM165Q9HC07 324 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 RHBDD3Q9Y3P4 386 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 ENSAO43768 121 aaKnown RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 BMP1P13497 986 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 EDN3P14138 238 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 CCL11P51671 97 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 AFF3P51826 1226 aaKnown RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 CTC1Q2NKJ3 1217 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 AKR1C8PQ5T2L2 129 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 TMEM184AQ6ZMB5 413 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 TCEAL8Q8IYN2 117 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 WDTC1Q8N5D0 677 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 TCEAL4Q96EI5 215 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 UTP23Q9BRU9 249 aaKnown RBP10.58□□□□□ -0.72
PTCH1-205ENST00000418258 SLC12A9Q9BXP2 914 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 MTG2Q9H4K7 406 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 OR14J1Q9UGF5 321 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 ITGB4P16144 1822 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 LAMA4Q16363 1823 aa10.58□□□□□ -0.72
PTCH1-205ENST00000418258 D6RAR5 112 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 PTGESO14684 152 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 HTRA2O43464 458 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 IL4RP24394 825 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 HOXA9P31269 272 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 SNTB2Q13425 540 aaKnown RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 SFT2D3Q587I9 215 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 PAPD5Q8NDF8 572 aaKnown RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 OR5D14Q8NGL3 314 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 MYADMQ96S97 322 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 MACROD1Q9BQ69 325 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 DMRT3Q9NQL9 472 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 A0A0U1RQK1 487 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 INMT-MINDY4F8WBC2 141 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 KIAA0513O60268 411 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 SCRG1O75711 98 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 STK17BO94768 372 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 LAMP1P11279 417 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 CD34P28906 385 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ERVPABLB-1P60509 514 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 TBRG1Q3YBR2 411 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 WDR53Q7Z5U6 358 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 PHC2Q8IXK0 858 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ACOT4Q8N9L9 421 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 OR1S1Q8NH92 325 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ARRDC3Q96B67 414 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 SSX3Q99909 188 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 POT1Q9NUX5 634 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 LRFN1Q9P244 771 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 TIMM8AO60220 97 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ALDOBP05062 364 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF182P17025 639 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 LUMP51884 338 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ZP2Q05996 745 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 BLOC1S3Q6QNY0 202 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 FUBP1Q96AE4 644 aaKnown RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 DTD2Q96FN9 168 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 AMDHD1Q96NU7 426 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 MMP27Q9H306 513 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 SYNPO2LQ9H987 977 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF355PQ9NSJ1 428 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 OR6C6A6NF89 314 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 NDUFB2O95178 105 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 MPIG6BO95866 241 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 OR8U9P0C7N5 309 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 DLSTP36957 453 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 MRPS21P82921 87 aaKnown RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF704Q6ZNC4 412 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 CUTCQ9NTM9 273 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms