RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 SNX32Q86XE0 403 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 ANKFN1Q8N957 763 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 FADS6Q8N9I5 356 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 FAM83FQ8NEG4 500 aaPredicted RBP11.36□□□□□ -0.59
SKA1-203ENST00000417656 OR2M3Q8NG83 312 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 OR2B2Q9GZK3 357 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 DSN1Q9H410 356 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 SDHAF3Q9NRP4 125 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 FAM53CQ9NYF3 392 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 MED11Q9P086 117 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 TINAGQ9UJW2 476 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 MKLN1Q9UL63 735 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 NDUFAF1Q9Y375 327 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 WDR45Q9Y484 360 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 MYO18BQ8IUG5 2567 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 FREM3P0C091 2139 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 TRGV8A0A0C4DH27 118 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 A0A1B0GVC2 190 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 A0A1W2PQD3 144 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 CLIC1O00299 241 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 FBP2O00757 339 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 AQP7O14520 342 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 SNX3O60493 162 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 HCN1O60741 890 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 CBR3O75828 277 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 H6PDO95479 791 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 TPOP07202 933 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 CHRM4P08173 479 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 STSP08842 583 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 SRD5A2P31213 254 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 PTGS2P35354 604 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 ATP12AP54707 1039 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 NFYCQ13952 458 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 NDUFAF6Q330K2 333 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 PDZK1Q5T2W1 519 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 DLEU7Q6UYE1 221 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 CPLX4Q7Z7G2 160 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 CD163Q86VB7 1156 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 ZNF619Q8N2I2 560 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 C10orf111Q8N326 155 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 DPP10Q8N608 796 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 ZNF527Q8NB42 609 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 DUSP19Q8WTR2 217 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 TSPEARQ8WU66 669 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 SH3YL1Q96HL8 342 aaPredicted RBP11.35□□□□□ -0.59
SKA1-203ENST00000417656 CPPED1Q9BRF8 314 aaPredicted RBP11.35□□□□□ -0.59
SKA1-203ENST00000417656 TRIM8Q9BZR9 551 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 HOXD1Q9GZZ0 328 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 RAD21L1Q9H4I0 556 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 IKZF5Q9H5V7 419 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 RUBCNLQ9H714 662 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 ACKR4Q9NPB9 350 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 MRGBPQ9NV56 204 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 P2RX2Q9UBL9 471 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 KCNE5Q9UJ90 142 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 ZNF835Q9Y2P0 537 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 SLC6A5Q9Y345 797 aa11.35□□□□□ -0.59
SKA1-203ENST00000417656 RP1L1Q8IWN7 2480 aaPredicted RBP11.34□□□□□ -0.59
SKA1-203ENST00000417656 IGLV3-32A0A0A0MS00 114 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 C15orf38-AP3S2A0A0A6YYH1 394 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 NPIPA2E9PIF3 369 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 NPIPA3F8WFD2 350 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 OIP5O43482 229 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 SUSD5O60279 629 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 SEMA7AO75326 666 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 BCHEP06276 602 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 NR2F1P10589 423 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 DPP4P27487 766 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 CA7P43166 264 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 MAGEA8P43361 318 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 ZNF117Q03924 483 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 CHRNEQ04844 493 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 SRSF1Q07955 248 aaKnown RBP eCLIP11.34□□□□□ -0.59
SKA1-203ENST00000417656 C17orf67Q0P5P2 114 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 CAPRIN1Q14444 709 aaKnown RBP11.34□□□□□ -0.59
SKA1-203ENST00000417656 RGNQ15493 299 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 MAPRE2Q15555 327 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 MAPK11Q15759 364 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 KLHL26Q53HC5 615 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 REP15Q6BDI9 236 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 Q6ZPB1 254 aaPredicted RBP11.34□□□□□ -0.59
SKA1-203ENST00000417656 FJX1Q86VR8 437 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 OR14L1PQ8NHC6 308 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 NEIL3Q8TAT5 605 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 FAM57AQ8TBR7 257 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 PHOSPHO1Q8TCT1 267 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 TRNT1Q96Q11 434 aaKnown RBP11.34□□□□□ -0.59
SKA1-203ENST00000417656 KLHDC3Q9BQ90 382 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 QRSL1Q9H0R6 528 aaKnown RBP11.34□□□□□ -0.59
SKA1-203ENST00000417656 SLC38A1Q9H2H9 487 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 POLE3Q9NRF9 147 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 TAS2R10Q9NYW0 307 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 ERRFI1Q9UJM3 462 aaPredicted RBP11.34□□□□□ -0.59
SKA1-203ENST00000417656 LIPT1Q9Y234 373 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 DTNAQ9Y4J8 743 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 HIVEP3Q5T1R4 2406 aa11.34□□□□□ -0.59
SKA1-203ENST00000417656 DNAJC13O75165 2243 aa11.33□□□□□ -0.59
SKA1-203ENST00000417656 RELNP78509 3460 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 POLEQ07864 2286 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 OR14I1A6ND48 311 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms