RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 MAGEA1P43355 309 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 KIR3DL2P43630 455 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 FASLGP48023 281 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 GPR143P51810 404 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 MAT1AQ00266 395 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 FOXL1Q12952 345 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 TUBB3Q13509 450 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 DDX39BQ13838 428 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 CCNIQ14094 377 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 PDK1Q15118 436 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 RPS6KA1Q15418 735 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 CA9Q16790 459 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 TIGD6Q17RP2 521 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 GPR33Q49SQ1 333 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 FGD3Q5JSP0 725 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 LIN54Q6MZP7 749 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 C11orf63Q6NUN7 778 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC27A4Q6P1M0 643 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 SUSD1Q6UWL2 747 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 DPY19L3Q6ZPD9 716 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 OTOAQ7RTW8 1153 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 NT5DC3Q86UY8 548 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC22A16Q86VW1 577 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 MEX3DQ86XN8 651 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 NRROSQ86YC3 692 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 DENND6AQ8IWF6 608 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 UBQLNLQ8IYU4 475 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 LGI2Q8N0V4 545 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 PDIK1LQ8N165 341 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 ZNF619Q8N2I2 560 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 ZCCHC7Q8N3Z6 543 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 OR1N1Q8NGS0 311 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 AGR3Q8TD06 166 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 ST8SIA4Q92187 359 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 GTF2H4Q92759 462 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 SNAPC3Q92966 411 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 MUL1Q969V5 352 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 AP2M1Q96CW1 435 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 LRRC46Q96FV0 321 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 ST6GAL2Q96JF0 529 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 HSFY1Q96LI6 401 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 RNF145Q96MT1 663 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 PPP1R2P1Q96PQ5 205 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 OR14A2Q96R54 314 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 AGAP2Q99490 1192 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 NEU1Q99519 415 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 PLIN2Q99541 437 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 DCUN1D5Q9BTE7 237 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 PAPOLGQ9BWT3 736 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 NLNQ9BYT8 704 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 MS4A7Q9GZW8 240 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 SHARPINQ9H0F6 387 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 WWP1Q9H0M0 922 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 GORASP2Q9H8Y8 452 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 MYOZ1Q9NP98 299 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 OBP2BQ9NPH6 170 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 NECTIN3Q9NQS3 549 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 GSN-AS1Q9NRJ2 163 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 GRHL1Q9NZI5 618 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 GRHPRQ9UBQ7 328 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 FBXO5Q9UKT4 447 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 ELF5Q9UKW6 265 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 RARRES3Q9UL19 164 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 MKLN1Q9UL63 735 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 CDC14AQ9UNH5 594 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 HS3ST2Q9Y278 367 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 GPR52Q9Y2T5 361 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 RNF11Q9Y3C5 154 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 CLIC4Q9Y696 253 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 SESN1Q9Y6P5 492 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 SONP18583 2426 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 MGAM2Q2M2H8 2515 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 FAM234BA2RU67 622 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 RAB19A4D1S5 217 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 TMEM202A6NGA9 273 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 ARHGAP42A6NI28 874 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 HACD1B0YJ81 288 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 FCHO1O14526 889 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 TSPAN4O14817 238 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 PHYHO14832 338 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 TOX3O15405 576 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 SLC31A2O15432 143 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 BUB1O43683 1085 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 TLX2O43763 284 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 UGDHO60701 494 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 TRIM13O60858 407 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 SMPD2O60906 423 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 SNAPC5O75971 98 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 NSA2O95478 260 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 FGGP02679 453 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 C1QBP02746 253 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 PCCBP05166 539 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 LCKP06239 509 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 KLK3P07288 261 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 RRASP10301 218 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 COX5BP10606 129 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 COX4I1P13073 169 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 TNNI1P19237 187 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 GCSHP23434 173 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 UQCRC1P31930 480 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms