RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ANK2Q01484 3957 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 RAI1Q7Z5J4 1906 aaPredicted RBP16.3■□□□□ 0.2
VCP-202ENST00000417448 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 A0A0G2JND7 137 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 C2orf72A6NCS6 295 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 EMC8O43402 210 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 REM1O75628 298 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 TGDSO95455 350 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 PSMG1O95456 288 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 ACP2P11117 423 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 DRD5P21918 477 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 S100A3P33764 101 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 TIMP3P35625 211 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 RFX3P48380 749 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 PSG6Q00889 435 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 PLCXD2Q0VAA5 305 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 GAB1Q13480 694 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 SPDYE7PQ495Y7 208 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 SLC15A4Q8N697 577 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 OR4A15Q8NGL6 344 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 NEIL3Q8TAT5 605 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 PIK3R3Q92569 461 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 EFHD2Q96C19 240 aaPredicted RBP16.3■□□□□ 0.2
VCP-202ENST00000417448 GIMAP5Q96F15 307 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 INPP5KQ9BT40 448 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 ZCCHC3Q9NUD5 404 aaKnown RBP16.3■□□□□ 0.2
VCP-202ENST00000417448 JKAMPQ9P055 326 aa16.3■□□□□ 0.2
VCP-202ENST00000417448 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.3■□□□□ 0.2
VCP-202ENST00000417448 MED12Q93074 2177 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 FRG2CA6NGY1 282 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 LRRC3CA6NJW4 275 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 COQ9O75208 318 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 UGT2B11O75310 529 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 SLC22A3O75751 556 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 P04436 131 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 IDO1P14902 403 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 GABRA3P34903 492 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 CCT3P49368 545 aaKnown RBP16.29■□□□□ 0.2
VCP-202ENST00000417448 CLNS1AP54105 237 aaKnown RBP16.29■□□□□ 0.2
VCP-202ENST00000417448 NRG3P56975 720 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 KRTAP1-1Q07627 177 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 TP53BP2Q13625 1128 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 NTRK2Q16620 822 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 PDCD4Q53EL6 469 aaKnown RBP16.29■□□□□ 0.2
VCP-202ENST00000417448 LACC1Q8IV20 430 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 OR8J2Q8NGG1 315 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 SMPDL3BQ92485 455 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 SLC9A6Q92581 669 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 TESCQ96BS2 214 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 ERP27Q96DN0 273 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 HSPBAP1Q96EW2 488 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 SGCZQ96LD1 299 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 RILPQ96NA2 401 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 BTBD9Q96Q07 612 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 NODALQ96S42 347 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 ADOQ96SZ5 270 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 CCDC28BQ9BUN5 200 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 C3orf14Q9HBI5 128 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 PROK2Q9HC23 129 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 SH2D2AQ9NP31 389 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 FLRT3Q9NZU0 649 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 OR10H1Q9Y4A9 318 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 CHCHD2Q9Y6H1 151 aaPredicted RBP16.29■□□□□ 0.2
VCP-202ENST00000417448 HEATR5AQ86XA9 2040 aa16.29■□□□□ 0.2
VCP-202ENST00000417448 EEF1E1-BLOC1S5C9J1V9 151 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 EEF1E1O43324 174 aaKnown RBP16.28■□□□□ 0.2
VCP-202ENST00000417448 PPM1BO75688 479 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 HMGN2P05204 90 aaKnown RBP16.28■□□□□ 0.2
VCP-202ENST00000417448 GSNP06396 782 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 NCF2P19878 526 aaPredicted RBP16.28■□□□□ 0.2
VCP-202ENST00000417448 CDKN2CP42773 168 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 TRPC1P48995 793 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 RPS26P62854 115 aaKnown RBP16.28■□□□□ 0.2
VCP-202ENST00000417448 LASP1Q14847 261 aaKnown RBP16.28■□□□□ 0.2
VCP-202ENST00000417448 MLC1Q15049 377 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 GSTA3Q16772 222 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 SLC22A10Q63ZE4 541 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 MIER2Q8N344 545 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 SLC16A11Q8NCK7 471 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 JADE3Q92613 823 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 DIO2Q92813 273 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 HGDQ93099 445 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 VPS33AQ96AX1 596 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 PERPQ96FX8 193 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 CHMP6Q96FZ7 201 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 DACH2Q96NX9 599 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 OR52E6Q96RD3 313 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 ZBTB18Q99592 522 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 TMEM120AQ9BXJ8 343 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 ACKR4Q9NPB9 350 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 FBXO34Q9NWN3 711 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 CNOT11Q9UKZ1 510 aaKnown RBP16.28■□□□□ 0.2
VCP-202ENST00000417448 KCNE3Q9Y6H6 103 aa16.28■□□□□ 0.2
VCP-202ENST00000417448 PRSS51A0A1B0GVH4 220 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 MBD3L4A6NDZ8 208 aaPredicted RBP16.27■□□□□ 0.2
VCP-202ENST00000417448 MBD3L5A6NJ08 208 aaPredicted RBP16.27■□□□□ 0.2
VCP-202ENST00000417448 C17orf51A8MQB3 221 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 AHRRA9YTQ3 701 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 TO15178 435 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 SLITRK5O94991 958 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms