RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CYSRT1A8MQ03 144 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 BCKDKO14874 412 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 SNX3O60493 162 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 FCMRO60667 390 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 C1QCP02747 245 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 CD1EP15812 388 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 DPP4P27487 766 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 MVDP53602 400 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 DSTNP60981 165 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 GANABQ14697 944 aaKnown RBP21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 RGNQ15493 299 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 MMEL1Q495T6 779 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 EID3Q8N140 333 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 FADS6Q8N9I5 356 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 FAM83FQ8NEG4 500 aaPredicted RBP21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 OR2M3Q8NG83 312 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 OR14L1PQ8NHC6 308 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 FAM57AQ8TBR7 257 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 RTN4RQ9BZR6 473 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 SAP130Q9H0E3 1048 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 SLC6A15Q9H2J7 730 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 FAM53CQ9NYF3 392 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 TAS2R10Q9NYW0 307 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 SLC25A37Q9NYZ2 338 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 CALML5Q9NZT1 146 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 VAPAQ9P0L0 249 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 P2RX2Q9UBL9 471 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 ACAD8Q9UKU7 415 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 LIPGQ9Y5X9 500 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 GMEB1Q9Y692 573 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 NBASA2RRP1 2371 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 BBIP1A8MTZ0 92 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 NPIPA2E9PIF3 369 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 NPIPB9F8W1W9 429 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 NPIPA3F8WFD2 350 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 GTPBP1O00178 669 aaKnown RBP21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 ADAM10O14672 748 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 TPOP07202 933 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 ETFAP13804 333 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 HOXB9P17482 250 aaPredicted RBP21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 NFYCQ13952 458 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 ZNF141Q15928 474 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 ZNF630Q2M218 657 aaPredicted RBP21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 C4orf17Q53FE4 359 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 DLEU7Q6UYE1 221 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 LRRC74BQ6ZQY2 392 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 FGD2Q7Z6J4 655 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 DHDDSQ86SQ9 333 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 CHERPQ8IWX8 916 aaKnown RBP21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 ZNF619Q8N2I2 560 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 ZNF614Q8N883 585 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 GATSQ8NAP1 163 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 PHOSPHO1Q8TCT1 267 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 OR2B2Q9GZK3 357 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 MTHFD2LQ9H903 347 aaPredicted RBP21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 SLC5A6Q9Y289 635 aa21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 SPENQ96T58 3664 aaKnown RBP21.01■□□□□ 0.95
SMARCB1-205ENST00000417137 RP1L1Q8IWN7 2480 aaPredicted RBP21■□□□□ 0.95
SMARCB1-205ENST00000417137 C15orf38-AP3S2A0A0A6YYH1 394 aa21■□□□□ 0.95
SMARCB1-205ENST00000417137 NPIPA5A0A0B4J1W7 369 aa21■□□□□ 0.95
SMARCB1-205ENST00000417137 NPIPA7E9PJI5 369 aa21■□□□□ 0.95
SMARCB1-205ENST00000417137 H6PDO95479 791 aa21■□□□□ 0.95
SMARCB1-205ENST00000417137 NPIPA8P0DM63 369 aa21■□□□□ 0.95
SMARCB1-205ENST00000417137 CA7P43166 264 aa21■□□□□ 0.95
SMARCB1-205ENST00000417137 CYLC2Q14093 348 aaPredicted RBP21■□□□□ 0.95
SMARCB1-205ENST00000417137 SYPL1Q16563 259 aa21■□□□□ 0.95
SMARCB1-205ENST00000417137 EIPR1Q53HC9 387 aa21■□□□□ 0.95
SMARCB1-205ENST00000417137 COQ5Q5HYK3 327 aa21■□□□□ 0.95
SMARCB1-205ENST00000417137 WIPI1Q5MNZ9 446 aaPredicted RBP21■□□□□ 0.95
SMARCB1-205ENST00000417137 WLSQ5T9L3 541 aa21■□□□□ 0.95
SMARCB1-205ENST00000417137 TYW3Q6IPR3 259 aaKnown RBP21■□□□□ 0.95
SMARCB1-205ENST00000417137 YRDCQ86U90 279 aaKnown RBP21■□□□□ 0.95
SMARCB1-205ENST00000417137 MSRB3Q8IXL7 192 aa21■□□□□ 0.95
SMARCB1-205ENST00000417137 FAM26EQ8N5C1 309 aa21■□□□□ 0.95
SMARCB1-205ENST00000417137 ANKFN1Q8N957 763 aa21■□□□□ 0.95
SMARCB1-205ENST00000417137 RELTQ969Z4 430 aa21■□□□□ 0.95
SMARCB1-205ENST00000417137 PRRC2CQ9Y520 2896 aaKnown RBP20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 SVILO95425 2214 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 TRBV5-3A0A0A0MS03 114 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 LOC100653049A0A140TA62 436 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 LRRTM2O43300 516 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 KIAA0513O60268 411 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 KRT34O76011 436 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 NPPAP01160 153 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 CRISP3P54108 245 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 PER3P56645 1201 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 FUT5Q11128 374 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 C3AR1Q16581 482 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 RUNDC3AQ59EK9 446 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 PDZK1Q5T2W1 519 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 C1QL3Q5VWW1 255 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 FRRS1Q6ZNA5 592 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 MTDHQ86UE4 582 aaKnown RBP20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 RETREG3Q86VR2 466 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 PCYOX1LQ8NBM8 494 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 B4GALNT2Q8NHY0 566 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 CGREF1Q99674 301 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 ARMCX1Q9P291 453 aa20.99■□□□□ 0.95
SMARCB1-205ENST00000417137 ESPL1Q14674 2120 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 PRAMEF27A3QJZ7 478 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms