RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SIRT4Q9Y6E7 314 aaPredicted RBP13.77□□□□□ -0.2
NCKIPSD-204ENST00000416649 IRGMA1A4Y4 181 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 RNF13O43567 381 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 SUSD5O60279 629 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 GPR37L1O60883 481 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 APOC1P02654 83 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 COMMD6Q7Z4G1 85 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 ARL14EPQ8N8R7 260 aaPredicted RBP13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR1S1Q8NH92 325 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 SPATA5L1Q9BVQ7 753 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 DDX31Q9H8H2 851 aaKnown RBP13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF840PA6NDX5 716 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 LRRN3E7EW58 273 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF254O75437 659 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 C8GP07360 202 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 CLTBP09497 229 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 HNF1BP35680 557 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 MAPK9P45984 424 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 MEOX2P50222 304 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 CDH4P55283 916 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 MEF2AQ02078 507 aaPredicted RBP13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 PRSS53Q2L4Q9 553 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 CEACAM19Q7Z692 300 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC22A8Q8TCC7 542 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF707Q96C28 371 aaPredicted RBP13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 LRRN3Q9H3W5 708 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 C11orf49Q9H6J7 331 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 CXorf36Q9H7Y0 433 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 TAS2R3Q9NYW6 316 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 CBLCQ9ULV8 474 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 YIPF1Q9Y548 306 aa13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 KLF2Q9Y5W3 355 aaPredicted RBP13.77□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR6C74A6NCV1 312 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 AGAP14A8MT82 685 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 SELENOFO60613 162 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 KLK1P06870 262 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 PCSK2P16519 638 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 SPAM1P38567 509 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 GDNFP39905 211 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 PRMT2P55345 433 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 CDK5Q00535 292 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 GK2Q14410 553 aaPredicted RBP13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 FAM74A1Q5RGS3 127 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 HECTD3Q5T447 861 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 TMUB2Q71RG4 321 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 LINGO2Q7L985 606 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 ANKRD33Q7Z3H0 272 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF461Q8TAF7 563 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF558Q96NG5 402 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC6A20Q9NP91 592 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 H2AFY2Q9P0M6 372 aaPredicted RBP13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 IGF2P01344 180 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 UGT2B7P16662 529 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 ANXA7P20073 488 aaKnown RBP13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 HLA-FP30511 346 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 THBS2P35442 1172 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 MTNR1BP49286 362 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 HSPB3Q12988 150 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 CCSMST1Q4G0I0 132 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZFP82Q8N141 532 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF485Q8NCK3 441 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 NANPQ8TBE9 248 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZFPM2Q8WW38 1151 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 CLP1Q92989 425 aaKnown RBP13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 FAIM2Q9BWQ8 316 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 ACTR6Q9GZN1 396 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 BTBD1Q9H0C5 482 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 SYNDIG1Q9H7V2 258 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 C5AR2Q9P296 337 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 TBX21Q9UL17 535 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 MYOFQ9NZM1 2061 aa13.76□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZC3H12DA2A288 527 aaKnown RBP13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 NPIPB8E9PQR5 432 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC2A10O95528 541 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 CXCL10P02778 98 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 HMGN1P05114 100 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 FURINP09958 794 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 ACP5P13686 325 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 HMGA1P17096 107 aaKnown RBP13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 TBXA2RP21731 343 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 ACVR1BP36896 505 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 CAPZA2P47755 286 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC11A2P49281 568 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC16A1P53985 500 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 AP1S2P56377 157 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 SMIM11AP58511 58 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 FGL1Q08830 312 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 LTB4RQ15722 352 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 TMEM255AQ5JRV8 349 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 C18orf63Q68DL7 685 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC8B1Q6J4K2 584 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 SMARCD3Q6STE5 483 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF322Q6U7Q0 402 aaPredicted RBP13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 LRRN1Q6UXK5 716 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 HSD17B13Q7Z5P4 300 aaPredicted RBP13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 DNAJB7Q7Z6W7 309 aaPredicted RBP13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 HDDC3Q8N4P3 179 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR11G2Q8NGC1 345 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR51Q1Q8NH59 317 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 BRD9Q9H8M2 597 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms