RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 XKP51811 444 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 NUBP1P53384 320 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 SNRPNP63162 240 aaKnown RBP10.78□□□□□ -0.68
RFFL-205ENST00000415395 COX10Q12887 443 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 AMZ1Q400G9 498 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 C1QTNF12Q5T7M4 302 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 C12orf73Q69YU5 71 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 FAM180BQ6P0A1 224 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 XKRXQ6PP77 449 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 CEACAM20Q6UY09 585 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 HSDL2Q6YN16 418 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 PRSS41Q7RTY9 318 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 CCDC116Q8IYX3 515 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 GDPD1Q8N9F7 314 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 Q8N9G6 341 aaPredicted RBP10.78□□□□□ -0.68
RFFL-205ENST00000415395 SIMC1Q8NDZ2 872 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 NR4A3Q92570 626 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 SLC35G5Q96KT7 338 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 SPATA5L1Q9BVQ7 753 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 TP63Q9H3D4 680 aaPredicted RBP10.78□□□□□ -0.68
RFFL-205ENST00000415395 ZCCHC3Q9NUD5 404 aaKnown RBP10.78□□□□□ -0.68
RFFL-205ENST00000415395 MRPS33Q9Y291 106 aaKnown RBP10.78□□□□□ -0.68
RFFL-205ENST00000415395 RBMX2Q9Y388 322 aaKnown RBP10.78□□□□□ -0.68
RFFL-205ENST00000415395 UNC13CQ8NB66 2214 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 RP1P56715 2156 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 CCDC182A6NF36 153 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 ZNF860A6NHJ4 632 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 HMX3A6NHT5 357 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 H3BMH7 237 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 H3BN98 237 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 FOXS1O43638 330 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 ENTPD6O75354 484 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 GPX5O75715 221 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 RAB36O95755 333 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 GPR75O95800 540 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 GASTP01350 101 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 ATP1B1P05026 303 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 POU2F1P14859 743 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 GSTM3P21266 225 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 FEN1P39748 380 aaKnown RBP10.78□□□□□ -0.68
RFFL-205ENST00000415395 KHKP50053 298 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 PSPHP78330 225 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 SHC2P98077 582 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 ASAH1Q13510 395 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 GPR50Q13585 617 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 TP53BP2Q13625 1128 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 GANABQ14697 944 aaKnown RBP10.78□□□□□ -0.68
RFFL-205ENST00000415395 SF3B4Q15427 424 aaKnown RBP eCLIP10.78□□□□□ -0.68
RFFL-205ENST00000415395 SSX1Q16384 188 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 SLC25A30Q5SVS4 291 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 MFSD4BQ5TF39 518 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 ZNF770Q6IQ21 691 aaPredicted RBP10.78□□□□□ -0.68
RFFL-205ENST00000415395 MED25Q71SY5 747 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 OR9A4Q8NGU2 314 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 GRPEL2Q8TAA5 225 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 ELP4Q96EB1 424 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 DHRS1Q96LJ7 313 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 DEPDC7Q96QD5 511 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 POLR2J2Q9GZM3 115 aaKnown RBP10.78□□□□□ -0.68
RFFL-205ENST00000415395 POLR2J3Q9H1A7 115 aaKnown RBP10.78□□□□□ -0.68
RFFL-205ENST00000415395 HHATLQ9HCP6 504 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 ISYNA1Q9NPH2 558 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 STARD5Q9NSY2 213 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 PTGFRNQ9P2B2 879 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 CLCA2Q9UQC9 943 aa10.78□□□□□ -0.68
RFFL-205ENST00000415395 LSM2Q9Y333 95 aaKnown RBP10.78□□□□□ -0.68
RFFL-205ENST00000415395 WASHC1A8K0Z3 465 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 J3KTA2 159 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 SGK494L7N484 410 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 CTDSP2O14595 271 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 CHST10O43529 356 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 OR10H3O60404 316 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 TRIM3O75382 744 aaPredicted RBP10.77□□□□□ -0.69
RFFL-205ENST00000415395 CSO75390 466 aaKnown RBP10.77□□□□□ -0.69
RFFL-205ENST00000415395 RDH16O75452 317 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 CKMT1AP12532 417 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 CPMP14384 443 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 ZNF24P17028 368 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 MYL12AP19105 171 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 SIM1P81133 766 aaPredicted RBP10.77□□□□□ -0.69
RFFL-205ENST00000415395 DUSP2Q05923 314 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 BIKQ13323 160 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 GNA13Q14344 377 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 CARTPTQ16568 116 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 ATAD3CQ5T2N8 411 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 PDZK1Q5T2W1 519 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 DDI2Q5TDH0 399 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 GUSBP11Q6P575 273 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 ZNF595Q8IYB9 648 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 HORMAD2Q8N7B1 307 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 NANOGP1Q8N7R0 232 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 ASCC1Q8N9N2 400 aaKnown RBP10.77□□□□□ -0.69
RFFL-205ENST00000415395 C7orf57Q8NEG2 295 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 OR4D9Q8NGE8 314 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 OR6F1Q8NGZ6 308 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 ZNF354BQ96LW1 612 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 PHOX2BQ99453 314 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 MED18Q9BUE0 208 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 TSSK6Q9BXA6 273 aa10.77□□□□□ -0.69
RFFL-205ENST00000415395 POLDIP3Q9BY77 421 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms