RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 MIB2Q96AX9 1013 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 C12orf43Q96C57 262 aaKnown RBP3.69□□□□□ -1.82
LINC01048-201ENST00000414480 KLHL29Q96CT2 875 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 ASB9Q96DX5 294 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 SMIM12Q96EX1 92 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 OTUB1Q96FW1 271 aaPredicted RBP3.69□□□□□ -1.82
LINC01048-201ENST00000414480 PPP1R16AQ96I34 528 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 C4orf36Q96KX1 117 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 COQ10AQ96MF6 247 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 SLC6A18Q96N87 628 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 SFXN2Q96NB2 322 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 SIGLEC11Q96RL6 698 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 PCDHB18PQ96TA0 734 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 RNF2Q99496 336 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 VAT1Q99536 393 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 P2RY13Q9BPV8 354 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 HOPXQ9BPY8 73 aaPredicted RBP3.69□□□□□ -1.82
LINC01048-201ENST00000414480 FAM110AQ9BQ89 295 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 KLHDC3Q9BQ90 382 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 WDR77Q9BQA1 342 aaPredicted RBP3.69□□□□□ -1.82
LINC01048-201ENST00000414480 SLC35A5Q9BS91 424 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 C16orf70Q9BSU1 422 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 CHRDL1Q9BU40 450 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 MSTO1Q9BUK6 570 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 C20orf24Q9BUV8 137 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 PTDSS2Q9BVG9 487 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 NPLQ9BXD5 320 aaPredicted RBP3.69□□□□□ -1.82
LINC01048-201ENST00000414480 HDAC8Q9BY41 377 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 OR2AG1Q9H205 316 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 HRH4Q9H3N8 390 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 KAT8Q9H7Z6 458 aaKnown RBP3.69□□□□□ -1.82
LINC01048-201ENST00000414480 SGK2Q9HBY8 427 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 HEYLQ9NQ87 328 aaPredicted RBP3.69□□□□□ -1.82
LINC01048-201ENST00000414480 NANSQ9NR45 359 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 ABCC13Q9NSE7 274 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 ZNF701Q9NV72 531 aaPredicted RBP3.69□□□□□ -1.82
LINC01048-201ENST00000414480 ERVK13-1Q9NX77 482 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 HAO2Q9NYQ3 351 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 NLGN3Q9NZ94 848 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 MAT2BQ9NZL9 334 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 NCKIPSDQ9NZQ3 722 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 ADAM22Q9P0K1 906 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 RHCGQ9UBD6 479 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 RNF14Q9UBS8 474 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 FBXL17Q9UF56 701 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 PISDQ9UG56 409 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 MIOXQ9UGB7 285 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 ANAPC7Q9UJX3 599 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 ZNF223Q9UK11 482 aaPredicted RBP3.69□□□□□ -1.82
LINC01048-201ENST00000414480 DKKL1Q9UK85 242 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 POU2F3Q9UKI9 436 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 FBXL3Q9UKT7 428 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 IKZF3Q9UKT9 509 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 PADI1Q9ULC6 663 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 DAPP1Q9UN19 280 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 RASD1Q9Y272 281 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 TP53TG5Q9Y2B4 290 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 TNFRSF18Q9Y5U5 241 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 HCFC2Q9Y5Z7 792 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 TEP1Q99973 2627 aaKnown RBP3.69□□□□□ -1.82
LINC01048-201ENST00000414480 DENND4AQ7Z401 1863 aa3.69□□□□□ -1.82
LINC01048-201ENST00000414480 WDR81Q562E7 1941 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 FREM2Q5SZK8 3169 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 A0A1W2PQL4 384 aaPredicted RBP3.68□□□□□ -1.82
LINC01048-201ENST00000414480 TCRBV5S4A2TA0A5A2 114 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 TCRBV21S2A2A0A5A6 115 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 GRID2IPA4D2P6 1211 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 SHISA7A6NL88 538 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 DUXAA6NLW8 204 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 MAGEB17A8MXT2 336 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 H3BN98 237 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 PRMT5O14744 637 aaPredicted RBP3.68□□□□□ -1.82
LINC01048-201ENST00000414480 CLIC2O15247 247 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 TNFSF14O43557 240 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 PRKAB2O43741 272 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 OR10H2O60403 315 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 SPAG7O75391 227 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 RAD51DO75771 328 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 TM7SF2O76062 418 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 SUPT7LO94864 414 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 WDR47O94967 919 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 TJP3O95049 919 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 LY86O95711 162 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 SLC16A8O95907 504 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 CYB5R3P00387 301 aaPredicted RBP3.68□□□□□ -1.82
LINC01048-201ENST00000414480 EPOP01588 193 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 ERBB2P04626 1255 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 ZNF286BP0CG31 522 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 PLA2G2AP14555 144 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 DAOP14920 347 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 UCHL3P15374 230 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 ZNF28P17035 718 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 PCMT1P22061 227 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 ACHEP22303 614 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 DNASE1P24855 282 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 CD40P25942 277 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 STOMP27105 288 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 DCKP27707 260 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 GABRB3P28472 473 aa3.68□□□□□ -1.82
LINC01048-201ENST00000414480 C21orf33P30042 268 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms