RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 CTHRC1Q96CG8 243 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 ZBED6CLQ96FA7 236 aaPredicted RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 RBM18Q96H35 190 aaKnown RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 ZNF300Q96RE9 604 aaPredicted RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 BBS4Q96RK4 519 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 RHNO1Q9BSD3 238 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 CXorf36Q9H7Y0 433 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 CCNB1IP1Q9NPC3 277 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 SEMA3GQ9NS98 782 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 ANGPT4Q9Y264 503 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 ZNF451Q9Y4E5 1061 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 ZZEF1O43149 2961 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 A0A1W2PQ72 361 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 SYNDIG1LA6NDD5 238 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 TLX3O43711 291 aaPredicted RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 ICMTO60725 284 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 MRPS14O60783 128 aaKnown RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 BCAS1O75363 584 aaPredicted RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 WBP4O75554 376 aaKnown RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 GABARAPO95166 117 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 IFNA14P01570 189 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 ITGA2P17301 1181 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 FOLR3P41439 243 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 OR1E2P47887 323 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 MASP1P48740 699 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 RPS18P62269 152 aaKnown RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 SPIBQ01892 262 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 CLN3Q13286 438 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 AQP6Q13520 282 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 SSPNQ14714 243 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 CTF1Q16619 201 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 CRTC2Q53ET0 693 aaPredicted RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 LANCL3Q6ZV70 420 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 ANKRD37Q7Z713 158 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 SLC30A8Q8IWU4 369 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 ENTHD1Q8IYW4 607 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 OR10G2Q8NGC3 310 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 B4GALNT2Q8NHY0 566 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 SNIP1Q8TAD8 396 aaKnown RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 PTPMT1Q8WUK0 201 aaPredicted RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 APH1BQ8WW43 257 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 RORBQ92753 470 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 SIGLEC11Q96RL6 698 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 FEVQ99581 238 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 BCL7BQ9BQE9 202 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 RASSF1Q9NS23 344 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 GIMAP4Q9NUV9 329 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 ZNF69Q9UC07 566 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 PCDHGB7Q9Y5F8 929 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 HS3ST3B1Q9Y662 390 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 MGAQ8IWI9 3026 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 SH3PXD2BA1X283 911 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 A8MVJ9 347 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 PCDH17O14917 1159 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 RGS10O43665 173 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 FAM20BO75063 409 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 IGHEP01854 428 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 MT-ND2P03891 347 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 LIFP15018 202 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 S1PR1P21453 382 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 NTSP30990 170 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 MAP2K4P45985 399 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 NCBP2P52298 156 aaKnown RBP eCLIP9.22□□□□□ -0.93
DDB1-202ENST00000414411 MANFP55145 182 aaKnown RBP9.22□□□□□ -0.93
DDB1-202ENST00000414411 CDH12P55289 794 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 DSTNP60981 165 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 MVKQ03426 396 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 MAP4K2Q12851 820 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 SPCS2Q15005 226 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 MOGQ16653 247 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 PRICKLE4Q2TBC4 344 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 ZNF829Q3KNS6 432 aaPredicted RBP9.22□□□□□ -0.93
DDB1-202ENST00000414411 SAXO2Q658L1 398 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 FAAH2Q6GMR7 532 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 KIRREL2Q6UWL6 708 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 PPP1R32Q7Z5V6 425 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 ARMC8Q8IUR7 673 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 SLC5A8Q8N695 610 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 ZNF540Q8NDQ6 660 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 FNDC8Q8TC99 324 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 ZNF675Q8TD23 568 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 ADAMTS17Q8TE56 1095 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 METTL21AQ8WXB1 218 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 OR5P2Q8WZ92 322 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 BORCS5Q969J3 196 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 UBE2FQ969M7 185 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 NEURL3Q96EH8 262 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 WDR77Q9BQA1 342 aaPredicted RBP9.22□□□□□ -0.93
DDB1-202ENST00000414411 PELOQ9BRX2 385 aaKnown RBP9.22□□□□□ -0.93
DDB1-202ENST00000414411 NEUROD4Q9HD90 331 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 ADAP2Q9NPF8 381 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 SIRT3Q9NTG7 399 aaPredicted RBP9.22□□□□□ -0.93
DDB1-202ENST00000414411 PPIEQ9UNP9 301 aaKnown RBP9.22□□□□□ -0.93
DDB1-202ENST00000414411 ENTPD4Q9Y227 616 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 SNX8Q9Y5X2 465 aa9.22□□□□□ -0.93
DDB1-202ENST00000414411 MRPS18BQ9Y676 258 aaKnown RBP9.22□□□□□ -0.93
DDB1-202ENST00000414411 MED13Q9UHV7 2174 aa9.21□□□□□ -0.93
DDB1-202ENST00000414411 MED19A0JLT2 244 aaPredicted RBP9.21□□□□□ -0.93
DDB1-202ENST00000414411 SOCS6O14544 535 aa9.21□□□□□ -0.93
DDB1-202ENST00000414411 PLOD3O60568 738 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms