RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 NUS1Q96E22 293 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 ZNF558Q96NG5 402 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 GSDMCQ9BYG8 508 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 OR52A5Q9H2C5 316 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 SLC38A1Q9H2H9 487 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 OR51J1Q9H342 316 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 SRRDQ9UH36 339 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 ABT1Q9ULW3 272 aaKnown RBP13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 POM121CA8CG34 1229 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 H3BSH0 61 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 NUPL2O15504 423 aaKnown RBP13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 HOXA2O43364 376 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 ERI3O43414 337 aaKnown RBP13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 CERS1P27544 350 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 OR12D2P58182 307 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 ID2Q02363 134 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 TMEM255AQ5JRV8 349 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 CXXC5Q7LFL8 322 aaKnown RBP13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 SSX6Q7RTT6 188 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 NUDT13Q86X67 352 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 SPERTQ8NA61 448 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 OR7D2Q96RA2 312 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 AIF1LQ9BQI0 150 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 SLC13A4Q9UKG4 626 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 ELF5Q9UKW6 265 aaPredicted RBP13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 OBSL1O75147 1896 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 A0A087WV48 116 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 OR7A10O76100 309 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 TCRBP04435 133 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 WNT1P04628 370 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 INHAP05111 366 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 PCCBP05166 539 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 NAT1P18440 290 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 STOMP27105 288 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 CLCNKAP51800 687 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 PGGHGQ32M88 737 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 TJAP1Q5JTD0 557 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 OR4C11Q6IEV9 310 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 TMEM65Q6PI78 240 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 CD300LDQ6UXZ3 194 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 GDF7Q7Z4P5 450 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 BPHLQ86WA6 291 aaPredicted RBP13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 OR5M3Q8NGP4 307 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 DIO2Q92813 273 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 GPR137Q96N19 417 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 MCHR1Q99705 422 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 CAPN10Q9HC96 672 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 CYSLTR2Q9NS75 346 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 SAGE1Q9NXZ1 904 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 OR6C2Q9NZP2 312 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 ING4Q9UNL4 249 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 PLXNA2O75051 1894 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 PRR23AA6NEV1 266 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 TSPAN4O14817 238 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 FZD7O75084 574 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 DNAJB6O75190 326 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 GATBO75879 557 aaKnown RBP13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 RGS9O75916 674 aaPredicted RBP13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 RGS11O94810 467 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 PAPLNO95428 1278 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 MAPK9P45984 424 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 PITPNBP48739 271 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 RGS8P57771 180 aaPredicted RBP13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 TAS2R38P59533 333 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 SLC25A30Q5SVS4 291 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 SFXN4Q6P4A7 337 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 WDR88Q6ZMY6 472 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 C16orf62Q7Z3J2 963 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 IL17RCQ8NAC3 791 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 GIMAP1Q8WWP7 306 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 RAD51AP1Q96B01 352 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 LRRC3BQ96PB8 259 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 RBCK1Q9BYM8 510 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 MRPS18AQ9NVS2 196 aaKnown RBP13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 SNRNP200O75643 2136 aaKnown RBP13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 SPTBN5Q9NRC6 3674 aaKnown RBP13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 A0A1W2PPV9 198 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 PSMD9O00233 223 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 SIGLEC5O15389 551 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 SSNA1O43805 119 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 FGBP02675 491 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 RAF1P04049 648 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 PROS1P07225 676 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 FXYD6P3P58550 94 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 SIGLEC14Q08ET2 396 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 SLC16A11Q8NCK7 471 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 OR5J2Q8NH18 312 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 PIGXQ8TBF5 258 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 RGMAQ96B86 450 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 COQ10AQ96MF6 247 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 CACNG6Q9BXT2 260 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 MS4A7Q9GZW8 240 aaPredicted RBP13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 UBQLN3Q9H347 655 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 OR1A2Q9Y585 309 aa13.6□□□□□ -0.23
SEMA3F-202ENST00000413852 DAPL1A0PJW8 107 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 SOX30O94993 753 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 POU3F2P20265 443 aaPredicted RBP13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 TALDO1P37837 337 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 RFX3P48380 749 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 ZP1P60852 638 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms