RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 OR4C3Q8NH37 302 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 SCARB1Q8WTV0 552 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 ZNRF4Q8WWF5 429 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 ADGRG7Q96K78 797 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 C2orf48Q96LS8 159 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 SPATA16Q9BXB7 569 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 ILKAPQ9H0C8 392 aaPredicted RBP4.24□□□□□ -1.73
LSM5-205ENST00000409952 NXF5Q9H1B4 397 aaKnown RBP4.24□□□□□ -1.73
LSM5-205ENST00000409952 MRPS30Q9NP92 439 aaKnown RBP4.24□□□□□ -1.73
LSM5-205ENST00000409952 TUBG2Q9NRH3 451 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 C20orf96Q9NUD7 363 aaPredicted RBP4.24□□□□□ -1.73
LSM5-205ENST00000409952 AHSPQ9NZD4 102 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 IL36GQ9NZH8 169 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.24□□□□□ -1.73
LSM5-205ENST00000409952 GALPQ9UBC7 116 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 PRPF19Q9UMS4 504 aaKnown RBP4.24□□□□□ -1.73
LSM5-205ENST00000409952 RASD1Q9Y272 281 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 EXOSC1Q9Y3B2 195 aaKnown RBP4.24□□□□□ -1.73
LSM5-205ENST00000409952 MYH14Q7Z406 1995 aaKnown RBP4.23□□□□□ -1.73
LSM5-205ENST00000409952 TRBV11-1A0A0K0K1C0 115 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 TMCO5BA8MYB1 307 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 TM9SF1O15321 606 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 PRKAB2O43741 272 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 RANBP6O60518 1105 aaKnown RBP4.23□□□□□ -1.73
LSM5-205ENST00000409952 KHDRBS3O75525 346 aaKnown RBP4.23□□□□□ -1.73
LSM5-205ENST00000409952 SEC24AO95486 1093 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 GNA14O95837 355 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 SNAI1O95863 264 aaPredicted RBP4.23□□□□□ -1.73
LSM5-205ENST00000409952 ERCC1P07992 297 aaPredicted RBP4.23□□□□□ -1.73
LSM5-205ENST00000409952 STAG3L2P0CL84 134 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 PSG1P11464 419 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 IMPDH1P20839 514 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 CEACAM8P31997 349 aaPredicted RBP4.23□□□□□ -1.73
LSM5-205ENST00000409952 RPL13AP40429 203 aaKnown RBP4.23□□□□□ -1.73
LSM5-205ENST00000409952 BDKRB1P46663 353 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 EMDP50402 254 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 BCAP31P51572 246 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 PHEXP78562 749 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 CDR2Q01850 454 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 RBBP4Q09028 425 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 ASPHQ12797 758 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 FAM83EQ2M2I3 478 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 PXDC1Q5TGL8 231 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 METTL11BQ5VVY1 283 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 NEPROQ6NW34 567 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 KCNMB4Q86W47 210 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 SPATA24Q86W54 205 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 TRIM69Q86WT6 500 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 GABRG1Q8N1C3 465 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 TCAIMQ8N3R3 496 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 FGFRL1Q8N441 504 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 DHRSXQ8N5I4 330 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 SDR9C7Q8NEX9 313 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 SUN5Q8TC36 379 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 HPSE2Q8WWQ2 592 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 OR1E3Q8WZA6 343 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 NRGNQ92686 78 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 BADQ92934 168 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 SDSLQ96GA7 329 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 PPP1R16AQ96I34 528 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 PANX2Q96RD6 677 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 IL4I1Q96RQ9 567 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 TUBA1CQ9BQE3 449 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 RIOK1Q9BRS2 568 aaKnown RBP4.23□□□□□ -1.73
LSM5-205ENST00000409952 DUSP16Q9BY84 665 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 PITPNM3Q9BZ71 974 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 IL22Q9GZX6 179 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 AZI2Q9H6S1 392 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 SYNDIG1Q9H7V2 258 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 Q9HAA7 133 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 NMUR1Q9HB89 426 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 NT5MQ9NPB1 228 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 INTS9Q9NV88 658 aaKnown RBP4.23□□□□□ -1.73
LSM5-205ENST00000409952 ZNF221Q9UK13 617 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 ALG6Q9Y672 507 aa4.23□□□□□ -1.73
LSM5-205ENST00000409952 RPAP1Q9BWH6 1393 aaPredicted RBP4.23□□□□□ -1.73
LSM5-205ENST00000409952 FRMPD4Q14CM0 1322 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 A0A1W2PS18 150 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 CLEC18AA5D8T8 446 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 GLTPD2A6NH11 291 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 G3V4G9 280 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 SURF4O15260 269 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 RS1O15537 224 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 TGM6O95932 706 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 F10P00742 488 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 TSHBP01222 138 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 IGHG3P01860 377 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 ALOX5P09917 674 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 FGF3P11487 239 aaPredicted RBP4.22□□□□□ -1.73
LSM5-205ENST00000409952 BCKDHAP12694 445 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 DAOP14920 347 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 PTNP21246 168 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 SOX3P41225 446 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 NDST2P52849 883 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 DVL1P1P54792 670 aaPredicted RBP4.22□□□□□ -1.73
LSM5-205ENST00000409952 OC90Q02509 493 aaPredicted RBP4.22□□□□□ -1.73
LSM5-205ENST00000409952 KLF9Q13886 244 aaPredicted RBP4.22□□□□□ -1.73
LSM5-205ENST00000409952 SLC15A2Q16348 729 aa4.22□□□□□ -1.73
LSM5-205ENST00000409952 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
LSM5-205ENST00000409952 SLC25A47Q6Q0C1 308 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms