RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 FOLH1BQ9HBA9 442 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 CAPN10Q9HC96 672 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 FBXL21Q9UKT6 434 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 B3GNT3Q9Y2A9 372 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 CACNA1IQ9P0X4 2223 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 HRKO00198 91 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 CDC42EP2O14613 210 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 PRODHO43272 600 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 SDC3O75056 442 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 LYPD3O95274 346 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 IL9P15248 144 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 FNTBP49356 437 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 GAS1P54826 345 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 BTG2P78543 158 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 ERV3-1Q14264 604 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 ZC3H14Q6PJT7 736 aaKnown RBP18.66■□□□□ 0.58
USP39-204ENST00000409766 SLC36A4Q6YBV0 504 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 WDR88Q6ZMY6 472 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 Q7L0L9 218 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 SDR16C5Q8N3Y7 309 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 OR4Q3Q8NH05 313 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 NELL2Q99435 816 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 CHCHD6Q9BRQ6 235 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 PRRG3Q9BZD7 231 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 WDR12Q9GZL7 423 aaKnown RBP18.66■□□□□ 0.58
USP39-204ENST00000409766 CHRNA10Q9GZZ6 450 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 RNF167Q9H6Y7 350 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 HHATLQ9HCP6 504 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 PRTFDC1Q9NRG1 225 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 UCKL1Q9NWZ5 548 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 GPR52Q9Y2T5 361 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 CLDN4O14493 209 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 GUSBP08236 651 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 DRD5P21918 477 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 SSTR4P31391 388 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 FLYWCH1Q4VC44 716 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 C14orf28Q4W4Y0 310 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 SLC30A6Q6NXT4 461 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 BTLAQ7Z6A9 289 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 C11orf74Q86VG3 221 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 SIX5Q8N196 739 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 MFSD4AQ8N468 514 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 SPEM1Q8N4L4 309 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 VSTM2LQ96N03 204 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 RAB33BQ9H082 229 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 RACGAP1Q9H0H5 632 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 PDE7BQ9NP56 450 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 KRCC1Q9NPI7 259 aaPredicted RBP18.65■□□□□ 0.58
USP39-204ENST00000409766 SOHLH2Q9NX45 425 aa18.65■□□□□ 0.58
USP39-204ENST00000409766 ZNF223Q9UK11 482 aaPredicted RBP18.65■□□□□ 0.58
USP39-204ENST00000409766 hCG_2014768A0A024R1R8 64 aa18.64■□□□□ 0.58
USP39-204ENST00000409766 RAB36O95755 333 aa18.64■□□□□ 0.58
USP39-204ENST00000409766 HBQ1P09105 142 aa18.64■□□□□ 0.58
USP39-204ENST00000409766 PPM1FP49593 454 aaPredicted RBP18.64■□□□□ 0.58
USP39-204ENST00000409766 CSNK1EP49674 416 aaKnown RBP18.64■□□□□ 0.58
USP39-204ENST00000409766 ZNHIT3Q15649 155 aaPredicted RBP18.64■□□□□ 0.58
USP39-204ENST00000409766 KLHL22Q53GT1 634 aa18.64■□□□□ 0.58
USP39-204ENST00000409766 PAQR6Q6TCH4 344 aa18.64■□□□□ 0.58
USP39-204ENST00000409766 Q6ZNX1 250 aa18.64■□□□□ 0.58
USP39-204ENST00000409766 RNF113BQ8IZP6 322 aaKnown RBP18.64■□□□□ 0.58
USP39-204ENST00000409766 CLDN22Q8N7P3 220 aa18.64■□□□□ 0.58
USP39-204ENST00000409766 ANKK1Q8NFD2 765 aa18.64■□□□□ 0.58
USP39-204ENST00000409766 KBTBD8Q8NFY9 601 aa18.64■□□□□ 0.58
USP39-204ENST00000409766 OR4N2Q8NGD1 307 aa18.64■□□□□ 0.58
USP39-204ENST00000409766 MMABQ96EY8 250 aaPredicted RBP18.64■□□□□ 0.58
USP39-204ENST00000409766 EPHA6Q9UF33 1036 aa18.64■□□□□ 0.58
USP39-204ENST00000409766 TMEM184BQ9Y519 407 aaPredicted RBP18.64■□□□□ 0.58
USP39-204ENST00000409766 CDH10Q9Y6N8 788 aa18.64■□□□□ 0.58
USP39-204ENST00000409766 OR2W5A6NFC9 320 aa18.64■□□□□ 0.57
USP39-204ENST00000409766 KDM4EB2RXH2 506 aaPredicted RBP18.64■□□□□ 0.57
USP39-204ENST00000409766 SURF4O15260 269 aa18.64■□□□□ 0.57
USP39-204ENST00000409766 IGKV1D-16P01601 117 aa18.64■□□□□ 0.57
USP39-204ENST00000409766 PTNP21246 168 aa18.64■□□□□ 0.57
USP39-204ENST00000409766 TIMM50Q3ZCQ8 353 aa18.64■□□□□ 0.57
USP39-204ENST00000409766 TCTE1Q5JU00 501 aa18.64■□□□□ 0.57
USP39-204ENST00000409766 NKAIN2Q5VXU1 208 aa18.64■□□□□ 0.57
USP39-204ENST00000409766 CAMKK1Q8N5S9 505 aa18.64■□□□□ 0.57
USP39-204ENST00000409766 MCFD2Q8NI22 146 aa18.64■□□□□ 0.57
USP39-204ENST00000409766 IRAK4Q9NWZ3 460 aa18.64■□□□□ 0.57
USP39-204ENST00000409766 DTX4Q9Y2E6 619 aa18.64■□□□□ 0.57
USP39-204ENST00000409766 TP53BP1Q12888 1972 aaPredicted RBP18.64■□□□□ 0.57
USP39-204ENST00000409766 EML5Q05BV3 1969 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 FITM1A5D6W6 292 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 METTL15A6NJ78 407 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 SNTNA6NMZ2 147 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 DSCR3O14972 297 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 BMP4P12644 408 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 ZNF12P17014 697 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 MAOAP21397 527 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 SOX3P41225 446 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 GPR3P46089 330 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 RFX3P48380 749 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 RAB40BQ12829 278 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 TMED1Q13445 227 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 ZNF404Q494X3 552 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 MINDY4Q4G0A6 757 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 PDZK1Q5T2W1 519 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 TMEM239Q8WW34 195 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 DGAT2Q96PD7 388 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 SPRTNQ9H040 489 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms