RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 ZNF28P17035 718 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 PEBP1P30086 187 aaKnown RBP10.6□□□□□ -0.71
SNX13-202ENST00000409604 CNR2P34972 360 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 STAT5AP42229 794 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 LIN52Q52LA3 116 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 ENTPD8Q5MY95 495 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 MFSD12Q6NUT3 480 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 SLC35A4Q96G79 324 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 DDX31Q9H8H2 851 aaKnown RBP10.6□□□□□ -0.71
SNX13-202ENST00000409604 PPP1R3DO95685 299 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 SPARCP09486 303 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 SOX2P48431 317 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 CTXN1P60606 82 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 ERVK-25P63136 954 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 PRAMEF8Q5VWM4 474 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 PRAMEF7Q5VXH5 474 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 LCN8Q6JVE9 175 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 TCTN3Q6NUS6 607 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 PLBD1Q6P4A8 553 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 SERPINA11Q86U17 422 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 ZNF619Q8N2I2 560 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 DTX3Q8N9I9 347 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 SLC2A12Q8TD20 617 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 NRG4Q8WWG1 115 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 UBE2FQ969M7 185 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 ASPNQ9BXN1 380 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 EPS8L2Q9H6S3 715 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 ACSS1Q9NUB1 689 aaPredicted RBP10.6□□□□□ -0.71
SNX13-202ENST00000409604 FBXO34Q9NWN3 711 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 MALT1Q9UDY8 824 aa10.6□□□□□ -0.71
SNX13-202ENST00000409604 TRBV4-1A0A0J9YWV2 114 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 LNP1A1A4G5 178 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 DOK2O60496 412 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 SLC35E2P0CK97 266 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 CPZQ66K79 652 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 LRRC69Q6ZNQ3 347 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 BCDIN3DQ7Z5W3 292 aaKnown RBP10.59□□□□□ -0.71
SNX13-202ENST00000409604 RAB43Q86YS6 212 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 APLFQ8IW19 511 aaPredicted RBP10.59□□□□□ -0.71
SNX13-202ENST00000409604 LILRA2Q8N149 483 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 TSEN15Q8WW01 171 aaKnown RBP10.59□□□□□ -0.71
SNX13-202ENST00000409604 TMEM234Q8WY98 164 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 ADAD1Q96M93 576 aaKnown RBP10.59□□□□□ -0.71
SNX13-202ENST00000409604 DSN1Q9H410 356 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 SLC22A7Q9Y694 548 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 PTPRQQ9UMZ3 2332 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 ACACBO00763 2458 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 CHD5Q8TDI0 1954 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 A0A1W2PPV9 198 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 AZGP1P25311 298 aaKnown RBP10.59□□□□□ -0.71
SNX13-202ENST00000409604 MAP2K4P45985 399 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 YRDCQ86U90 279 aaKnown RBP10.59□□□□□ -0.71
SNX13-202ENST00000409604 ERI1Q8IV48 349 aaKnown RBP10.59□□□□□ -0.71
SNX13-202ENST00000409604 MOSPD2Q8NHP6 518 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 OMA1Q96E52 524 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 LRR1Q96L50 414 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 GPER1Q99527 375 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 PLGRKTQ9HBL7 147 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 IL1RAPQ9NPH3 570 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 PRDM9Q9NQV7 894 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 PKDREJQ9NTG1 2253 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 TVP23AA6NH52 213 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 FXYD1O00168 92 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 CASKO14936 926 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 TLX3O43711 291 aaPredicted RBP10.59□□□□□ -0.71
SNX13-202ENST00000409604 RCBTB2O95199 551 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 NSA2O95478 260 aaKnown RBP10.59□□□□□ -0.71
SNX13-202ENST00000409604 RENP00797 406 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 RHCEP18577 417 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 SMSP52788 366 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 SMN1Q16637 294 aaKnown RBP10.59□□□□□ -0.71
SNX13-202ENST00000409604 PODNL1Q6PEZ8 512 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 UXS1Q8NBZ7 420 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 TOR1AIP2Q8NFQ8 470 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 ZNF578Q96N58 590 aaPredicted RBP10.59□□□□□ -0.71
SNX13-202ENST00000409604 EPYCQ99645 322 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 CDC6Q99741 560 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 GALNT9Q9HCQ5 603 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 POFUT2Q9Y2G5 429 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 CHD8Q9HCK8 2581 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 THADAQ6YHU6 1953 aa10.59□□□□□ -0.71
SNX13-202ENST00000409604 ZFC3H1O60293 1989 aaKnown RBP10.58□□□□□ -0.72
SNX13-202ENST00000409604 DPPA5A6NC42 116 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 EFCAB10A6NFE3 127 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 FUT1P19526 365 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 PIGAP37287 484 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 PRKXP51817 358 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 PON3Q15166 354 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 ATP6AP1Q15904 470 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.58□□□□□ -0.72
SNX13-202ENST00000409604 CNEP1R1Q8N9A8 125 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 SDR9C7Q8NEX9 313 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 LMF1Q96S06 567 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 S100A13Q99584 98 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 TMED9Q9BVK6 235 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 RBM24Q9BX46 236 aaKnown RBP10.58□□□□□ -0.72
SNX13-202ENST00000409604 EGLN3Q9H6Z9 239 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 UBQLN4Q9NRR5 601 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 TAS2R10Q9NYW0 307 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 NPIPA2E9PIF3 369 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms