RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SMIM11AP58511 58 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 DCAF7P61962 342 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 FGFBP1Q14512 234 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 NCF4Q15080 339 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 DECR1Q16698 335 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 STPG1Q5TH74 334 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 TTC23Q5W5X9 447 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 PODNL1Q6PEZ8 512 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 PAPD4Q6PIY7 484 aaKnown RBP12.97□□□□□ -0.33
GPNMB-203ENST00000409458 PLEKHM3Q6ZWE6 761 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 SLC29A4Q7RTT9 530 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 CPEB2Q7Z5Q1 589 aaKnown RBP12.97□□□□□ -0.33
GPNMB-203ENST00000409458 PRR22Q8IZ63 422 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 ZNF441Q8N8Z8 693 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 APCDD1LQ8NCL9 501 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 B3GNT7Q8NFL0 401 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 ARSGQ96EG1 525 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 MUS81Q96NY9 551 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 GABARAPL3Q9BY60 117 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 PAPOLBQ9NRJ5 636 aaKnown RBP12.97□□□□□ -0.33
GPNMB-203ENST00000409458 TMCC3Q9ULS5 477 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 LOC100130705A0A1B0GUX0 176 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 SH3PXD2BA1X283 911 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 C9J4A7 227 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 BCKDKO14874 412 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 SLC16A6O15403 523 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 SEC24DO94855 1032 aaPredicted RBP12.96□□□□□ -0.33
GPNMB-203ENST00000409458 NTN1O95631 604 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 OXSR1O95747 527 aaPredicted RBP12.96□□□□□ -0.33
GPNMB-203ENST00000409458 GASTP01350 101 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 THY1P04216 161 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 JMJD7P0C870 316 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 POU2F1P14859 743 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 CDH2P19022 906 aaPredicted RBP12.96□□□□□ -0.33
GPNMB-203ENST00000409458 EPHA2P29317 976 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 NBL1P41271 181 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 CLK3P49761 638 aaKnown RBP12.96□□□□□ -0.33
GPNMB-203ENST00000409458 NR0B1P51843 470 aaKnown RBP12.96□□□□□ -0.33
GPNMB-203ENST00000409458 PSMD4P55036 377 aaKnown RBP12.96□□□□□ -0.33
GPNMB-203ENST00000409458 TRIP6Q15654 476 aaKnown RBP12.96□□□□□ -0.33
GPNMB-203ENST00000409458 HES3Q5TGS1 186 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 HLA-DQA1Q5Y7H0 255 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 RANBP3LQ86VV4 465 aaPredicted RBP12.96□□□□□ -0.33
GPNMB-203ENST00000409458 LSRQ86X29 649 aaPredicted RBP12.96□□□□□ -0.33
GPNMB-203ENST00000409458 OR4C3Q8NH37 302 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 ADAMTS16Q8TE57 1224 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 NR4A3Q92570 626 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 CNOT9Q92600 299 aaKnown RBP12.96□□□□□ -0.33
GPNMB-203ENST00000409458 GTPBP3Q969Y2 492 aaKnown RBP12.96□□□□□ -0.33
GPNMB-203ENST00000409458 TAAR9Q96RI9 348 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 DDA1Q9BW61 102 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 SEMA4CQ9C0C4 833 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 GRIP2Q9C0E4 1043 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 DNAJB12Q9NXW2 375 aaKnown RBP12.96□□□□□ -0.33
GPNMB-203ENST00000409458 PPIEQ9UNP9 301 aaKnown RBP12.96□□□□□ -0.33
GPNMB-203ENST00000409458 POFUT2Q9Y2G5 429 aa12.96□□□□□ -0.33
GPNMB-203ENST00000409458 TO15178 435 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 OR10H3O60404 316 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 CYP7B1O75881 506 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 OR5F1O95221 314 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 UMODP07911 640 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 LSM11P83369 360 aaKnown RBP eCLIP12.96□□□□□ -0.34
GPNMB-203ENST00000409458 BLMHQ13867 455 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 ZNF691Q5VV52 312 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 PGBD2Q6P3X8 592 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 TMEM154Q6P9G4 183 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 DEFB124Q8NES8 71 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 SLC41A3Q96GZ6 507 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 DEPDC7Q96QD5 511 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 LPAR4Q99677 370 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 ZPBPQ9BS86 351 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 ARMC7Q9H6L4 198 aa12.96□□□□□ -0.34
GPNMB-203ENST00000409458 LIN28AQ9H9Z2 209 aaKnown RBP12.96□□□□□ -0.34
GPNMB-203ENST00000409458 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.96□□□□□ -0.34
GPNMB-203ENST00000409458 C19orf25Q9UFG5 118 aaPredicted RBP12.96□□□□□ -0.34
GPNMB-203ENST00000409458 TESQ9UGI8 421 aaKnown RBP12.96□□□□□ -0.34
GPNMB-203ENST00000409458 PTRH2Q9Y3E5 179 aaKnown RBP12.96□□□□□ -0.34
GPNMB-203ENST00000409458 CCDC187A0A096LP49 1063 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 C9orf172C9J069 976 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 E9PQ18 207 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 ADAM11O75078 769 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 KLF7O75840 302 aaPredicted RBP12.95□□□□□ -0.34
GPNMB-203ENST00000409458 TNFAIP8O95379 198 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 UTS2O95399 124 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 DLGAP3O95886 979 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 SLC26A5P58743 744 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 RNF4P78317 190 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 ST3GAL3Q11203 375 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 NPRL3Q12980 569 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 TRAM2Q15035 370 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 NDUFAF6Q330K2 333 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 DESI1Q6ICB0 168 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 GDF7Q7Z4P5 450 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 GLRX5Q86SX6 157 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 GRAMD2AQ8IUY3 354 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 C8orf59Q8N0T1 100 aaPredicted RBP12.95□□□□□ -0.34
GPNMB-203ENST00000409458 SLC34A3Q8N130 599 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 C17orf47Q8NEP4 570 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 VMP1Q96GC9 406 aa12.95□□□□□ -0.34
GPNMB-203ENST00000409458 PITX2Q99697 317 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms