RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	RAB40B	Q12829	278 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	PIP5KL1	Q5T9C9	394 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	GDPD1	Q8N9F7	314 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	ASCC1	Q8N9N2	400 aa	Known RBP	12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	L3MBTL4	Q8NA19	623 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	MFSD9	Q8NBP5	474 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	SDR9C7	Q8NEX9	313 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	OR5J2	Q8NH18	312 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	BPIFA2	Q96DR5	249 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	GPN2	Q9H9Y4	310 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	RABL2A	Q9UBK7	228 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	RABL2B	Q9UNT1	228 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	SLC35A3	Q9Y2D2	325 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	RNF215	Q9Y6U7	377 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	TRPM3	Q9HCF6	1732 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	TDG	Q13569	410 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	HES5	Q5TA89	166 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	PODNL1	Q6PEZ8	512 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	CHDH	Q8NE62	594 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	OR2T11	Q8NH01	316 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	RANBP3	Q9H6Z4	567 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	USP36	Q9P275	1121 aa	Known RBP	12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	GM2A	P17900	193 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	RNASE10	Q5GAN6	216 aa	Known RBP	12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	FAM76B	Q5HYJ3	339 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	TRMT10A	Q8TBZ6	339 aa	Known RBP	12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	SLC25A44	Q96H78	314 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	ZIC5	Q96T25	663 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	C1QTNF2	Q9BXJ5	285 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	POT1	Q9NUX5	634 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	SAGE1	Q9NXZ1	904 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	PGAP2	Q9UHJ9	254 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	WDR37	Q9Y2I8	494 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	NUDT7	P0C024	238 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	CDK10	Q15131	360 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	SFRP4	Q6FHJ7	346 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	TMEM205	Q6UW68	189 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	ISL2	Q96A47	359 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	MGAT4C	Q9UBM8	478 aa		12.51	□□□□□ -0.41
CACNA1C-222	ENST00000406454	OR2T1	O43869	369 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	BRINP1	O60477	761 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	PTTG1	O95997	202 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	CDK1	P06493	297 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	MRPS21	P82921	87 aa	Known RBP	12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	EIF2B1	Q14232	305 aa	Known RBP	12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	SBSN	Q6UWP8	590 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	MEX3D	Q86XN8	651 aa	Known RBP	12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	VRK2	Q86Y07	508 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	NLGN4X	Q8N0W4	816 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	SYNPO	Q8N3V7	929 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	OR5W2	Q8NH69	310 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	HHIPL1	Q96JK4	782 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	NLK	Q9UBE8	527 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	GPR75	O95800	540 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	IL7	P13232	177 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	CD6	P30203	668 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	CCNJ	Q5T5M9	372 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	FRMPD2B	Q6IN97	320 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	GALNT11	Q8NCW6	608 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	STOML3	Q8TAV4	291 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	CNOT2	Q9NZN8	540 aa	Known RBP	12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454		A6NIZ1	184 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	SFTPB	P07988	381 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	MAOB	P27338	520 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	CD40LG	P29965	261 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	CXCR4	P61073	352 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	RAP1B	P61224	184 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	RAP1A	P62834	184 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	FAM205BP	Q63HN1	556 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	WDR53	Q7Z5U6	358 aa	Predicted RBP	12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	RLN3	Q8WXF3	142 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	EVA1A	Q9H8M9	152 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	ZNF443	Q9Y2A4	671 aa	Predicted RBP	12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	B4GAT1	O43505	415 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	ZNF806	P0C7X5	589 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	ADAMTS19	Q8TE59	1207 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	OR51E2	Q9H255	320 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	OR52D1	Q9H346	318 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	MEPE	Q9NQ76	525 aa	Predicted RBP	12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	KLHL9	Q9P2J3	617 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	PRAMEF8	Q5VWM4	474 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	PRAMEF7	Q5VXH5	474 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	TANGO2	Q6ICL3	276 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	TLDC1	Q6P9B6	456 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	FTMT	Q8N4E7	242 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	HAVCR2	Q8TDQ0	301 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	SPRYD4	Q8WW59	207 aa	Predicted RBP	12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	ARHGAP9	Q9BRR9	750 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	FOLH1B	Q9HBA9	442 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	GJE1	A6NN92	205 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	AIFM1	O95831	613 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	ATAD3C	Q5T2N8	411 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	SLCO4C1	Q6ZQN7	724 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454		Q6ZSR9	355 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	TAAR2	Q9P1P5	351 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	CBLC	Q9ULV8	474 aa		12.5	□□□□□ -0.41
CACNA1C-222	ENST00000406454	MEGF11	A6BM72	1044 aa		12.49	□□□□□ -0.41
CACNA1C-222	ENST00000406454	RBMS1	P29558	406 aa	Known RBP	12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms