RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 PIAS3Q9Y6X2 628 aa12.85□□□□□ -0.35
GSE1-203ENST00000405402 GXYLT2A0PJZ3 443 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 A8MVJ9 347 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 UPK1AO00322 258 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 GAPDHSO14556 408 aaPredicted RBP12.84□□□□□ -0.35
GSE1-203ENST00000405402 GPX5O75715 221 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 KCNJ5P48544 419 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 PRICKLE2Q7Z3G6 844 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 TMIEQ8NEW7 156 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 TRMT10AQ8TBZ6 339 aaKnown RBP12.84□□□□□ -0.35
GSE1-203ENST00000405402 TMEM255BQ8WV15 326 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 HS6ST2Q96MM7 605 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 OR10A4Q9H209 315 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 DKK3Q9UBP4 350 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 TMEM5Q9Y2B1 443 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 TVP23AA6NH52 213 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 RNF13O43567 381 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 CTBP2P56545 445 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 SF3B4Q15427 424 aaKnown RBP eCLIP12.84□□□□□ -0.354e-7■■■■□ 23.4
GSE1-203ENST00000405402 TMEM215Q68D42 235 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 PGBD2Q6P3X8 592 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 OR9A4Q8NGU2 314 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 DYNC2LI1Q8TCX1 351 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 PATE1Q8WXA2 126 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 NEURL3Q96EH8 262 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 DPCDQ9BVM2 203 aaPredicted RBP12.84□□□□□ -0.35
GSE1-203ENST00000405402 PINK1Q9BXM7 581 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 DIABLOQ9NR28 239 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.84□□□□□ -0.35
GSE1-203ENST00000405402 UGT2A1Q9Y4X1 527 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 RAB3BP20337 219 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 BCL6P41182 706 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 FGFBP1Q14512 234 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 RPE65Q16518 533 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 TMEM150AQ86TG1 271 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 S100A16Q96FQ6 103 aaKnown RBP12.84□□□□□ -0.35
GSE1-203ENST00000405402 C4orf36Q96KX1 117 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 MS4A4EQ96PG1 132 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 TAPBPLQ9BX59 468 aa12.84□□□□□ -0.35
GSE1-203ENST00000405402 PPIL3Q9H2H8 161 aaKnown RBP12.84□□□□□ -0.35
GSE1-203ENST00000405402 LRRN3E7EW58 273 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 ZNF670-ZNF695F2Z2N8 137 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 KIAA0355O15063 1070 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 YY2O15391 372 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 PRAMEF4O60810 478 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 VAMP1P23763 118 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 PSMA3P25788 255 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 XCR1P46094 333 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 ILKQ13418 452 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 ZMYND11Q15326 602 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 MRPL2Q5T653 305 aaKnown RBP12.83□□□□□ -0.35
GSE1-203ENST00000405402 PRAMEF9Q5VWM5 478 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 LRFN4Q6PJG9 635 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 Q6ZSR6 202 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 VWA5B2Q8N398 1253 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 OR5W2Q8NH69 310 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 HCAR2Q8TDS4 363 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 AKAP1Q92667 903 aaKnown RBP eCLIP12.83□□□□□ -0.354e-6■■■□□ 17.7
GSE1-203ENST00000405402 NEDD4LQ96PU5 975 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 LRRN3Q9H3W5 708 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 ATP13A2Q9NQ11 1180 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 WSB2Q9NYS7 404 aaPredicted RBP12.83□□□□□ -0.35
GSE1-203ENST00000405402 ACTR10Q9NZ32 417 aa12.83□□□□□ -0.35
GSE1-203ENST00000405402 PCP4L1A6NKN8 68 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 FNTBP49356 437 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 AKR1D1P51857 326 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 PDX1P52945 283 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 CLDN12P56749 244 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 ERVK-25P63136 954 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 EIF4EBP2Q13542 120 aaPredicted RBP12.83□□□□□ -0.36
GSE1-203ENST00000405402 OXA1LQ15070 435 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 TATDN3Q17R31 274 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 ALG11Q2TAA5 492 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 ARHGAP40Q5TG30 622 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 ATCAYQ86WG3 371 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 FOXRED2Q8IWF2 684 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 ARMC10Q8N2F6 343 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 SGTBQ96EQ0 304 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 ZNF582Q96NG8 517 aaPredicted RBP12.83□□□□□ -0.36
GSE1-203ENST00000405402 SYNPO2LQ9H987 977 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 ZNF226Q9NYT6 803 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 APOBEC3BQ9UH17 382 aaKnown RBP12.83□□□□□ -0.36
GSE1-203ENST00000405402 AHCTF1Q8WYP5 2266 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 MYOFQ9NZM1 2061 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 C17orf113A0A1B0GUU1 675 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 PDCD5O14737 125 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 RGS9O75916 674 aaPredicted RBP12.83□□□□□ -0.36
GSE1-203ENST00000405402 LBX1P52954 281 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 WNT3P56703 355 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 MAT1AQ00266 395 aaKnown RBP12.83□□□□□ -0.36
GSE1-203ENST00000405402 ARHGAP19Q14CB8 494 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 TCTN1Q2MV58 587 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 ALKBH2Q6NS38 261 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 LEG1Q6P5S2 330 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 ZER1Q7Z7L7 766 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 PJA1Q8NG27 643 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 OR2L3Q8NG85 312 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 TMEM163Q8TC26 289 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 ALOXE3Q9BYJ1 711 aa12.83□□□□□ -0.36
GSE1-203ENST00000405402 RDH8Q9NYR8 311 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms