RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CXCL12P48061 93 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 MALLQ13021 153 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 GK3PQ14409 553 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 LRRC26Q2I0M4 334 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 ATAD3CQ5T2N8 411 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 PODNL1Q6PEZ8 512 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 ADAMTS16Q8TE57 1224 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 ZC3H10Q96K80 434 aaKnown RBP17.1■□□□□ 0.33
COL18A1-204ENST00000400337 M0R036 132 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 RBMS1P29558 406 aaKnown RBP17.1■□□□□ 0.33
COL18A1-204ENST00000400337 TMEM31Q5JXX7 168 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 DPY19L2P1Q6NXN4 242 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 OR9A4Q8NGU2 314 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 CHFRQ96EP1 664 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 ACTR6Q9GZN1 396 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 MGAT4CQ9UBM8 478 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 DDX60Q8IY21 1712 aaKnown RBP17.1■□□□□ 0.33
COL18A1-204ENST00000400337 RAD1O60671 282 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 CD38P28907 300 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 SYNPOQ8N3V7 929 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 SFXN5Q8TD22 340 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 ACOT11Q8WXI4 607 aaPredicted RBP17.1■□□□□ 0.33
COL18A1-204ENST00000400337 RBM24Q9BX46 236 aaKnown RBP17.1■□□□□ 0.33
COL18A1-204ENST00000400337 THSD1Q9NS62 852 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 IGLV3-10A0A075B6K4 115 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 CAPNS1P04632 268 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 CPMP14384 443 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 RPL19P84098 196 aaKnown RBP17.1■□□□□ 0.33
COL18A1-204ENST00000400337 GGTA1PQ4G0N0 100 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 GALNT6Q8NCL4 622 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 OR5W2Q8NH69 310 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 OR5B2Q96R09 309 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 OR51E2Q9H255 320 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 SYT4Q9H2B2 425 aa17.1■□□□□ 0.33
COL18A1-204ENST00000400337 ZNF850A8MQ14 1090 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 ABLIM3O94929 683 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 DNASE1P24855 282 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 ERV3-1Q14264 604 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 PIWIL3Q7Z3Z3 882 aaKnown RBP17.09■□□□□ 0.33
COL18A1-204ENST00000400337 FTMTQ8N4E7 242 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 TRMT10AQ8TBZ6 339 aaKnown RBP17.09■□□□□ 0.33
COL18A1-204ENST00000400337 KCNS2Q9ULS6 477 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 H0YIV9 168 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 J3KTA2 159 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 FOXE1O00358 373 aaPredicted RBP17.09■□□□□ 0.33
COL18A1-204ENST00000400337 RP2O75695 350 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 AHRP35869 848 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 PITPNBP48739 271 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 TUBB3Q13509 450 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 RHBDD1Q8TEB9 315 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 ZNF442Q9H7R0 627 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 NUMBLQ9Y6R0 609 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 NOTOA8MTQ0 251 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 ERVK-25P63136 954 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 ENTPD8Q5MY95 495 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 WFDC5Q8TCV5 224 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 KLHL15Q96M94 604 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 LRIT1Q9P2V4 623 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 BTAF1O14981 1849 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 GPR75O95800 540 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 AIFM1O95831 613 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 FBXO45P0C2W1 286 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 NUDT1P36639 197 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 ABHD17BQ5VST6 288 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 PHC2Q8IXK0 858 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 SPRYD4Q8WW59 207 aaPredicted RBP17.09■□□□□ 0.33
COL18A1-204ENST00000400337 BCL7BQ9BQE9 202 aa17.09■□□□□ 0.33
COL18A1-204ENST00000400337 GPN2Q9H9Y4 310 aaPredicted RBP17.09■□□□□ 0.33
COL18A1-204ENST00000400337 MRPS14O60783 128 aaKnown RBP17.08■□□□□ 0.33
COL18A1-204ENST00000400337 EIF2B1Q14232 305 aaKnown RBP17.08■□□□□ 0.33
COL18A1-204ENST00000400337 PLEKHN1Q494U1 663 aaPredicted RBP17.08■□□□□ 0.33
COL18A1-204ENST00000400337 LYSMD4Q5XG99 296 aa17.08■□□□□ 0.33
COL18A1-204ENST00000400337 FAM205BPQ63HN1 556 aa17.08■□□□□ 0.33
COL18A1-204ENST00000400337 SBSNQ6UWP8 590 aa17.08■□□□□ 0.33
COL18A1-204ENST00000400337 LRRC69Q6ZNQ3 347 aa17.08■□□□□ 0.33
COL18A1-204ENST00000400337 VRK3Q8IV63 474 aa17.08■□□□□ 0.33
COL18A1-204ENST00000400337 LSM14AQ8ND56 463 aaKnown RBP17.08■□□□□ 0.33
COL18A1-204ENST00000400337 SYT7O43581 403 aa17.08■□□□□ 0.33
COL18A1-204ENST00000400337 BRINP1O60477 761 aa17.08■□□□□ 0.33
COL18A1-204ENST00000400337 ZNF35P13682 527 aa17.08■□□□□ 0.33
COL18A1-204ENST00000400337 OPRL1P41146 370 aa17.08■□□□□ 0.33
COL18A1-204ENST00000400337 MRPS21P82921 87 aaKnown RBP17.08■□□□□ 0.33
COL18A1-204ENST00000400337 STOML3Q8TAV4 291 aa17.08■□□□□ 0.33
COL18A1-204ENST00000400337 CPPED1Q9BRF8 314 aaPredicted RBP17.08■□□□□ 0.33
COL18A1-204ENST00000400337 OR52D1Q9H346 318 aa17.08■□□□□ 0.33
COL18A1-204ENST00000400337 FN3KQ9H479 309 aa17.08■□□□□ 0.33
COL18A1-204ENST00000400337 DDX31Q9H8H2 851 aaKnown RBP17.08■□□□□ 0.33
COL18A1-204ENST00000400337 ACSS1Q9NUB1 689 aaPredicted RBP17.08■□□□□ 0.33
COL18A1-204ENST00000400337 SRPK3Q9UPE1 567 aa17.08■□□□□ 0.33
COL18A1-204ENST00000400337 SLC35A3Q9Y2D2 325 aa17.08■□□□□ 0.33
COL18A1-204ENST00000400337 H0YGG7 62 aa17.08■□□□□ 0.32
COL18A1-204ENST00000400337 ARF3P61204 181 aaPredicted RBP17.08■□□□□ 0.32
COL18A1-204ENST00000400337 RNASE10Q5GAN6 216 aaKnown RBP17.08■□□□□ 0.32
COL18A1-204ENST00000400337 FRMPD2BQ6IN97 320 aa17.08■□□□□ 0.32
COL18A1-204ENST00000400337 Q6ZSR9 355 aa17.08■□□□□ 0.32
COL18A1-204ENST00000400337 ASCC1Q8N9N2 400 aaKnown RBP17.08■□□□□ 0.32
COL18A1-204ENST00000400337 ZSCAN1Q8NBB4 408 aa17.08■□□□□ 0.32
COL18A1-204ENST00000400337 CHDHQ8NE62 594 aaPredicted RBP17.08■□□□□ 0.32
COL18A1-204ENST00000400337 COQ8AQ8NI60 647 aa17.08■□□□□ 0.32
COL18A1-204ENST00000400337 ENY2Q9NPA8 101 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms