RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 FAM159AQ6UWV7 190 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 GCNT7Q6ZNI0 430 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 SLC16A9Q7RTY1 509 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 PEX26Q7Z412 305 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 GDF7Q7Z4P5 450 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 GPR137CQ8N3F9 429 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 OR4N2Q8NGD1 307 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 VANGL1Q8TAA9 524 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 ZNF596Q8TC21 504 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 PNPT1Q8TCS8 783 aaKnown RBP4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 HM13Q8TCT9 377 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 CXorf40AQ8TE69 158 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 PIH1D2Q8WWB5 315 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 XAGE5Q8WWM1 108 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 CDKL2Q92772 493 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 P3H4Q92791 437 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 EMG1Q92979 244 aaKnown RBP4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 TMEM125Q96AQ2 219 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 FBXL8Q96CD0 374 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 IMP4Q96G21 291 aaKnown RBP4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 BMFQ96LC9 184 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 FRG2BQ96QU4 278 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 LYSMD1Q96S90 227 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 VAT1Q99536 393 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 C17orf62Q9BQA9 187 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 CHRDL1Q9BU40 450 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 SPATA16Q9BXB7 569 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 ROPN1BQ9BZX4 212 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 VCX3BQ9H321 246 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 ZNF768Q9H5H4 540 aaKnown RBP4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 GAREM1Q9H706 876 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 TMEM185BQ9H7F4 350 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 COG4Q9H9E3 785 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 NT5MQ9NPB1 228 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 IL26Q9NPH9 171 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 GDF3Q9NR23 364 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 RBM22Q9NW64 420 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 RHCGQ9UBD6 479 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 SEC14L3Q9UDX4 400 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 AMFRQ9UKV5 643 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 RPL26L1Q9UNX3 145 aaKnown RBP4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 FOXJ3Q9UPW0 622 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 RNF24Q9Y225 148 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 CBY1Q9Y3M2 126 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 HEY1Q9Y5J3 304 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 A3GALT2U3KPV4 340 aa4.95□□□□□ -1.62
HMGB3P7-201ENST00000400214 COL27A1Q8IZC6 1860 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 APC2O95996 2303 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 A0A087WUV0 522 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 TRAV25A0A0B4J276 109 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 A0A0J9YYE9 177 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 SPTY2D1-AS1A0A0U1RR47 76 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 TMEM247A6NEH6 219 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 PRSS46E5RG02 174 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 KCNK1O00180 336 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 SDHDO14521 159 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 FPGTO14772 594 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 RAD51BO15315 384 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 SLC31A1O15431 190 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 SUV39H1O43463 412 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 ATP8B1O43520 1251 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 TLX3O43711 291 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 TMPRSS11DO60235 418 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 PAK4O96013 591 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 JCHAINP01591 159 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 TRBC1P01850 177 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 KRT6AP02538 564 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 APOA1P02647 267 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 HOXC4P09017 264 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 ALPIP09923 528 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 ZNF30P17039 623 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 GM2AP17900 193 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 TPSB2P20231 275 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 UQCRC2P22695 453 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 CA4P22748 312 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 TEAD1P28347 426 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 LCN1P31025 176 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 SSTR4P31391 388 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 TRIM23P36406 574 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 HSD17B3P37058 310 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 CDX1P47902 265 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 ARRB1P49407 418 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 CCT8P50990 548 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 CCL11P51671 97 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 GP2P55259 537 aaKnown RBP4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 SELENOVP59797 346 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 MAXP61244 160 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 E2F1Q01094 437 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 DPTQ07507 201 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 TRIP10Q15642 601 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 TPSAB1Q15661 275 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 CPSF6Q16630 551 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 AGAP6Q5VW22 663 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 PYHIN1Q6K0P9 492 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 Q6ZSR6 202 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 RHOUQ7L0Q8 258 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 EIF3MQ7L2H7 374 aaKnown RBP4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 VTCN1Q7Z7D3 282 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 KLBQ86Z14 1044 aa4.94□□□□□ -1.62
HMGB3P7-201ENST00000400214 SLC22A18ASQ8N1D0 253 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms