RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 F5H5K5 113 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 PET100P0DJ07 73 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 HTR1EP28566 365 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 MC3RP41968 323 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 ZNF81P51508 661 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 ERVPABLB-1P60509 514 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 TRAM1Q15629 374 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 HACD2Q6Y1H2 254 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 SULT2B1O00204 365 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 AK1P00568 194 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 PNMTP11086 282 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 SQSTM1Q13501 440 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 MANEALQ5VSG8 457 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 TMEM53Q6P2H8 277 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 PDZD3Q86UT5 571 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 FAM46BQ96A09 425 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 ARL5BQ96KC2 179 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 DPH1Q9BZG8 443 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 SYT4Q9H2B2 425 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 HS3ST3A1Q9Y663 406 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 TAF1LQ8IZX4 1826 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 AKAP11Q9UKA4 1901 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 PLSCR5A0PG75 271 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 TTLL8A6PVC2 850 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 TCN2P20062 427 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 SERTAD2Q14140 314 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 PGM2L1Q6PCE3 622 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 SLC39A13Q96H72 371 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 FAM71F1Q96KD3 344 aaPredicted RBP13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 HS3ST2Q9Y278 367 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 RASAL1O95294 804 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 HMGA1P17096 107 aaKnown RBP13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 TFF2Q03403 129 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 EIF2B1Q14232 305 aaKnown RBP13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 ZNF829Q3KNS6 432 aaPredicted RBP13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 OR2A12Q8NGT7 310 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 FUBP1Q96AE4 644 aaKnown RBP13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 WNT16Q9UBV4 365 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 INMT-MINDY4F8WBC2 141 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 SIGLEC6O43699 453 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 RP2O75695 350 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 EDN3P14138 238 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 ZP2Q05996 745 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 KIR2DS3Q14952 304 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 RSPO2Q6UXX9 243 aaPredicted RBP13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 LANCL3Q6ZV70 420 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 WDR53Q7Z5U6 358 aaPredicted RBP13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 ISOC1Q96CN7 298 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 GPR83Q9NYM4 423 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 PCDHGA8Q9Y5G5 932 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 PCDH17O14917 1159 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 TNFSF12O43508 249 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 AKR1C2P52895 323 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 RAB11BQ15907 218 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 Q8N402 240 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 TEX26Q8N6G2 289 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 ZNF649Q9BS31 505 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 PELI2Q9HAT8 420 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 PPP1R14DQ9NXH3 145 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 BORCS7-ASMTA0A0B4J1R7 106 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 TMEM221A6NGB7 291 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 EEF1E1-BLOC1S5C9J1V9 151 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 M0R296 226 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 IL9P15248 144 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 HTR6P50406 440 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 CLDN8P56748 225 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 FXYD4P59646 89 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 ZNF610Q8N9Z0 462 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 HDAC2Q92769 488 aaKnown RBP13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 C16orf58Q96GQ5 468 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 SAMD8Q96LT4 415 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 EIF5A2Q9GZV4 153 aaKnown RBP13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 NXF5Q9H1B4 397 aaKnown RBP13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 MTHFD2LQ9H903 347 aaPredicted RBP13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 SCN9AQ15858 1988 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 M0R3H8 397 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 SYT7O43581 403 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 EPHA1P21709 976 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 VASPP50552 380 aaPredicted RBP13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 INHBCP55103 352 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 PPA1Q15181 289 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 ZNF791Q3KP31 576 aaPredicted RBP13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 HES5Q5TA89 166 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 HOXD1Q9GZZ0 328 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 TP63Q9H3D4 680 aaPredicted RBP13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 LHX3Q9UBR4 397 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 HIF3AQ9Y2N7 669 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 RGPD4Q7Z3J3 1758 aa13.41□□□□□ -0.26
PCDHA11-201ENST00000398640 AGAP5A6NIR3 686 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 PITPNBP48739 271 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 MAT1AQ00266 395 aaKnown RBP13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 GPR157Q5UAW9 335 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 FGF14Q92915 247 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 ZDHHC5Q9C0B5 715 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 KIAA0513O60268 411 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 MT-ND2P03891 347 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 CDKN2CP42773 168 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 SGSHP51688 502 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 CLCN2P51788 898 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms