RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 LYARQ9NX58 379 aaKnown RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 TBX21Q9UL17 535 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 PDCD11Q14690 1871 aaKnown RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 PSMD9O00233 223 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 NAA10P41227 235 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 STAT5AP42229 794 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 PSPHP78330 225 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 EXOSC7Q15024 291 aaKnown RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 FBXO15Q8NCQ5 510 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 NECTIN4Q96NY8 510 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 SGPP1Q9BX95 441 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 HOXD1Q9GZZ0 328 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 NANSQ9NR45 359 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 FBXO8Q9NRD0 319 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 TXNL4BQ9NX01 149 aaKnown RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 SLC27A6Q9Y2P4 619 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ATG4BQ9Y4P1 393 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 A0A087WUU8 490 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 HYKKA2RU49 373 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 FAM47E-STBD1D6RA91 191 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PPP1R3DO95685 299 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SCG5P05408 212 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SAGP10523 405 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ITGA3P26006 1051 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PDE7AQ13946 482 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 GNA13Q14344 377 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 NNATQ16517 81 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 AGAP6Q5VW22 663 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SFRP4Q6FHJ7 346 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PAMR1Q6UXH9 720 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF433Q8N7K0 673 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 CYB561A3Q8NBI2 242 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 OR2A1Q8NGT9 310 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 GOT1L1Q8NHS2 421 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 NARS2Q96I59 477 aaKnown RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 FRMD6Q96NE9 622 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 AGAP4Q96P64 663 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PFDN5Q99471 154 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 TM9SF2Q99805 663 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PINK1Q9BXM7 581 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 NKX2-4Q9H2Z4 354 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 UGT2A1Q9Y4X1 527 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PRRC2BQ5JSZ5 2229 aaKnown RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PCNX2A6NKB5 2137 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 MAGEB4O15481 346 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ADRA2AP08913 450 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PEPDP12955 493 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SHC1P29353 583 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 GJA4P35212 333 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 RPA4Q13156 261 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 HYAL4Q2M3T9 481 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 C2orf76Q3KRA6 126 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 TIGD4Q8IY51 512 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 VWA5B2Q8N398 1253 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 COX18Q8N8Q8 333 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 POMGNT2Q8NAT1 580 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SLC7A13Q8TCU3 470 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 TM9SF4Q92544 642 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 AHCYL2Q96HN2 611 aaKnown RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PRRC1Q96M27 445 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PLA2G12AQ9BZM1 189 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SPRTNQ9H040 489 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ELL3Q9HB65 397 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 IL21RQ9HBE5 538 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 TAS2R7Q9NYW3 318 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 HCN3Q9P1Z3 774 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 FAM171A2A8MVW0 826 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 NPIPB8E9PQR5 432 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 TP53P04637 393 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 GIPP09681 153 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF888P0CJ79 500 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 IL7P13232 177 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ALAS2P22557 587 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PKLRP30613 574 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 GABRA3P34903 492 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SLC9A3P48764 834 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ERVK-21P61565 698 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 E2F2Q14209 437 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PGGHGQ32M88 737 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PRPF38BQ5VTL8 546 aaKnown RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF776Q68DI1 518 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ANKRD33Q7Z3H0 272 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 CA5BP1Q8WTZ4 195 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 METTL2AQ96IZ6 378 aaKnown RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 CITED4Q96RK1 184 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 GAL3ST1Q99999 423 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 BTBD2Q9BX70 525 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 NDRG2Q9UN36 371 aaKnown RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF407Q9C0G0 2248 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF670-ZNF695F2Z2N8 137 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SPINT1O43278 529 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 LILRB3O75022 631 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 HPGDP15428 266 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 AHRP35869 848 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 GCGRP47871 477 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 MAN2A2P49641 1150 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 IRF3Q14653 427 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 TCTN3Q6NUS6 607 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 CDH24Q86UP0 819 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ARL14Q8N4G2 192 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms