RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SULT1A3P0DMM9 295 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 SULT1A4P0DMN0 295 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 ALPPL2P10696 532 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 PSMB5P28074 263 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 FGF9P31371 208 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 RPL35P42766 123 aaKnown RBP14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 MTNR1AP48039 350 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 SLC6A11P48066 632 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 AKR1D1P51857 326 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 EPHA4P54764 986 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 CDK5Q00535 292 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 MLLT1Q03111 559 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 TPBGQ13641 420 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 C3P1Q6ZMU1 363 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 ASPGQ86U10 573 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 MORN4Q8NDC4 146 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 FGF11Q92914 225 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 YIPF5Q969M3 257 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 SENP5Q96HI0 755 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 PAWRQ96IZ0 340 aaKnown RBP14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 MS4A8Q9BY19 250 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 QRSL1Q9H0R6 528 aaKnown RBP14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 DPAGT1Q9H3H5 408 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 CDCP1Q9H5V8 836 aa14.95□□□□□ -0.02
CHMP1A-201ENST00000397901 PRODHO43272 600 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 SERPIND1P05546 499 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 ACADLP28330 430 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 LCN1P31025 176 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 VSX2P58304 361 aaPredicted RBP14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 RAB40BQ12829 278 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 OPCMLQ14982 345 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 NTRK2Q16620 822 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 SLC36A4Q6YBV0 504 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 ASB18Q6ZVZ8 466 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 KANSL1Q7Z3B3 1105 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 C17orf64Q86WR6 236 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 FTMTQ8N4E7 242 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 SETD7Q8WTS6 366 aaKnown RBP14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 POF1BQ8WVV4 589 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 RFT1Q96AA3 541 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 SAP130Q9H0E3 1048 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 LHX9Q9NQ69 397 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 POMT2Q9UKY4 750 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 CLCA2Q9UQC9 943 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 SLC9A8Q9Y2E8 581 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 CACNG2Q9Y698 323 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 WNT6Q9Y6F9 365 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 TMEM129A0AVI4 362 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 H7BY64 318 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 DNASE2O00115 360 aaPredicted RBP14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 PPM1DO15297 605 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 FRS3O43559 492 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 PRKRAO75569 313 aaKnown RBP14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 CH25HO95992 272 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 STATHP02808 62 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 LIMS3P0CW19 117 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 LIMS4P0CW20 117 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 GABRA5P31644 462 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 BTCP35070 178 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 BLVRAP53004 296 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 HTRA4P83105 476 aaPredicted RBP14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 EFNB1P98172 346 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 NDUFA9Q16795 377 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 SLC25A30Q5SVS4 291 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 C6orf132Q5T0Z8 1188 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 C1orf94Q6P1W5 598 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 LCTLQ6UWM7 567 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 ZNF600Q6ZNG1 722 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 TEX47Q8TBZ9 253 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 PRAP1Q96NZ9 151 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 ZCCHC2Q9C0B9 1178 aaKnown RBP14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 EPHX3Q9H6B9 360 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 C11orf49Q9H6J7 331 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 ZCCHC3Q9NUD5 404 aaKnown RBP14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 CNIH4Q9P003 139 aa14.94□□□□□ -0.02
CHMP1A-201ENST00000397901 GLOD5A6NK44 160 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 FGF2P09038 288 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 PPP2R1BP30154 601 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 TEAD2Q15562 447 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 CD300LDQ6UXZ3 194 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 MARCH9Q86YJ5 346 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 OR4F15Q8NGB8 312 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 OTULINQ96BN8 352 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 PPP1R16AQ96I34 528 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 CXorf58Q96LI9 332 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 THAP7Q9BT49 309 aaPredicted RBP14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 FGF20Q9NP95 211 aaPredicted RBP14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 KIF26AQ9ULI4 1882 aaPredicted RBP14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 SHISA3A0PJX4 238 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 SPINT1O43278 529 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 OR5F1O95221 314 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 PLATP00750 562 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 APOC1P02654 83 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 CHRM4P08173 479 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 SLC27A4Q6P1M0 643 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 NRSN1Q8IZ57 195 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 STPG2Q8N412 459 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 RAD51AP1Q96B01 352 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 NUS1Q96E22 293 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 AIF1LQ9BQI0 150 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms