RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CCKBRP32239 447 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 CTF1Q16619 201 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 DEFB134Q4QY38 66 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 SPANXN2Q5MJ10 180 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 FCRL6Q6DN72 434 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 CEP68Q76N32 757 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 WDR5BQ86VZ2 330 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 EFCAB3Q8N7B9 438 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 FGF11Q92914 225 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 ELF4Q99607 663 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-206ENST00000397617 SLC38A3Q99624 504 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 ACAT2Q9BWD1 397 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 SEMA6AQ9H2E6 1030 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 NIPAL2Q9H841 368 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 SP140LQ9H930 580 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 PCDHGA3Q9Y5H0 932 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 A0A0B4J2E0 115 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 A0A1B0GX12 115 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 ANKRD33BA6NCL7 494 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 OR6C74A6NCV1 312 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 KPNA4O00629 521 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-206ENST00000397617 DSCR3O14972 297 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 OR10H3O60404 316 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 ERAL1O75616 437 aaKnown RBP5.46□□□□□ -1.54
PTPRD-206ENST00000397617 CD1EP15812 388 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 DCTDP32321 178 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 SIMC1Q8NDZ2 872 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 OR4C6Q8NH72 309 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 RPLP0P6Q8NHW5 317 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 NFKBIDQ8NI38 313 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 TRPC4Q9UBN4 977 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF229Q9UJW7 825 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 WDR37Q9Y2I8 494 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 WNK2Q9Y3S1 2297 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 MYO7BQ6PIF6 2116 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 OR6C70A6NIJ9 312 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 SOAT1P35610 550 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 WNT4P56705 351 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 LINC00114Q6XXX2 140 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 CHAC2Q8WUX2 184 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 YIPF6Q96EC8 236 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 MCHR1Q99705 422 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 PRMT8Q9NR22 394 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-206ENST00000397617 GXYLT2A0PJZ3 443 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 A8MX80 341 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 PFDN1O60925 122 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 F7P08709 466 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-206ENST00000397617 CDH3P22223 829 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 ADH6P28332 368 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 HTR1FP30939 366 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 SLC6A6P31641 620 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 S100A5P33763 92 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 RPL6Q02878 288 aaKnown RBP5.45□□□□□ -1.54
PTPRD-206ENST00000397617 PTGES3Q15185 160 aaKnown RBP5.45□□□□□ -1.54
PTPRD-206ENST00000397617 STK11Q15831 433 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 LAIR2Q6ISS4 152 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 OR6T1Q8NGN1 323 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 STK35Q8TDR2 534 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 TRIM63Q969Q1 353 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 ADNPQ9H2P0 1102 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 RIBC2Q9H4K1 309 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 NDUFB11Q9NX14 153 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 PCDHGA1Q9Y5H4 931 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 MAGED1Q9Y5V3 778 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-206ENST00000397617 OR52A4PA6NMU1 304 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF670-ZNF695F2Z2N8 137 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 NDUFB2O95178 105 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 VAMP5O95183 116 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 SERPINA3P01011 423 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 EGFP01133 1207 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 PBX2P40425 430 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 MTNR1AP48039 350 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 TGM4P49221 684 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 ST3GAL4Q11206 333 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 SLC14A1Q13336 389 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 TMEM92Q6UXU6 159 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 Q6ZNX1 250 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 VASH1Q7L8A9 365 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-206ENST00000397617 OR13H1Q8NG92 308 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 TMEM163Q8TC26 289 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 DYNC2LI1Q8TCX1 351 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 ZHX1-C8orf76Q96EF9 292 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 MYOCQ99972 504 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 TTYH2Q9BSA4 534 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 SPHK1Q9NYA1 384 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 COPZ2Q9P299 210 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 LRRTM2O43300 516 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 COL9A1P20849 921 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 IDH2P48735 452 aaKnown RBP5.45□□□□□ -1.54
PTPRD-206ENST00000397617 METAP1P53582 386 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 LRRC73Q5JTD7 316 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 CCDC71Q8IV32 467 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-206ENST00000397617 HMGB4Q8WW32 186 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 SGCZQ96LD1 299 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 TMEM168Q9H0V1 697 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF768Q9H5H4 540 aaKnown RBP5.45□□□□□ -1.54
PTPRD-206ENST00000397617 FKRPQ9H9S5 495 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 RPRD1BQ9NQG5 326 aaKnown RBP5.45□□□□□ -1.54
PTPRD-206ENST00000397617 KLHL3Q9UH77 587 aa5.45□□□□□ -1.54
PTPRD-206ENST00000397617 SPIN1Q9Y657 262 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms