RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 STMN3Q9NZ72 180 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 A0A1W2PPV9 198 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 B4GAT1O43505 415 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 FARS2O95363 451 aaKnown RBP7.7□□□□□ -1.18
PTPRD-204ENST00000397606 KRT8P05787 483 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 GDF1P27539 372 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 CYB561P49447 251 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 EMP3P54852 163 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 ZIC1Q15915 447 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 MAPK14Q16539 360 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 DUSP5Q16690 384 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.7□□□□□ -1.18
PTPRD-204ENST00000397606 OGFRL1Q5TC84 451 aaPredicted RBP7.7□□□□□ -1.18
PTPRD-204ENST00000397606 HES3Q5TGS1 186 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 MZT2AQ6P582 158 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 DNAJC22Q8N4W6 341 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 FAM86B1Q8N7N1 296 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 FAM46AQ96IP4 442 aaKnown RBP7.7□□□□□ -1.18
PTPRD-204ENST00000397606 NDUFB2O95178 105 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 MED26O95402 600 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 GBX2P52951 348 aaPredicted RBP7.69□□□□□ -1.18
PTPRD-204ENST00000397606 NUBP1P53384 320 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 MLC1Q15049 377 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 ENTPD8Q5MY95 495 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 GPR107Q5VW38 600 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 RHBDD2Q6NTF9 364 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF793Q6ZN11 406 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 C6orf62Q9GZU0 229 aaPredicted RBP7.69□□□□□ -1.18
PTPRD-204ENST00000397606 RNF121Q9H920 327 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 NPFFR2Q9Y5X5 522 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF670-ZNF695F2Z2N8 137 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 OSMP13725 252 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 MRPL19P49406 292 aaKnown RBP7.69□□□□□ -1.18
PTPRD-204ENST00000397606 PDX1P52945 283 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 MVKQ03426 396 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 DNASE1L3Q13609 305 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 PDE7AQ13946 482 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 OR1Q1Q15612 314 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 GTF2IRD2BQ6EKJ0 949 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 GTF2IRD2Q86UP8 949 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 TMEM178AQ8NBL3 297 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 NUDT8Q8WV74 236 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 UTP4Q969X6 686 aaKnown RBP7.69□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF160Q9HCG1 818 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 AGPAT4Q9NRZ5 378 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 FAM86C1Q9NVL1 165 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 CD300AQ9UGN4 299 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 KLF15Q9UIH9 416 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 RPH3AQ9Y2J0 694 aaPredicted RBP7.69□□□□□ -1.18
PTPRD-204ENST00000397606 MRPS2Q9Y399 296 aaKnown RBP7.69□□□□□ -1.18
PTPRD-204ENST00000397606 H3BML4 177 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 RAD1O60671 282 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 FUCA1P04066 466 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 CD2P06729 351 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF84P51523 738 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 QSOX2Q6ZRP7 698 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 SLC25A45Q8N413 288 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 OR1J4Q8NGS1 313 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 SAP25Q8TEE9 199 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 DUSP19Q8WTR2 217 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 THOC3Q96J01 351 aaKnown RBP7.69□□□□□ -1.18
PTPRD-204ENST00000397606 ADAD1Q96M93 576 aaKnown RBP7.69□□□□□ -1.18
PTPRD-204ENST00000397606 CENPMQ9NSP4 180 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 MYO10Q9HD67 2058 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 UPK1AO00322 258 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 DNAJB5O75953 348 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 SFTPDP35247 375 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 NUDT6P53370 316 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 IST1P53990 364 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 CSNK2A1P68400 391 aaPredicted RBP7.69□□□□□ -1.18
PTPRD-204ENST00000397606 HOXC5Q00444 222 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 TLE3Q04726 772 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 PUM1Q14671 1186 aaKnown RBP eCLIP7.69□□□□□ -1.18
PTPRD-204ENST00000397606 ARHGAP11BQ3KRB8 267 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF528Q3MIS6 628 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 C5orf46Q6UWT4 87 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 LINC00696Q6ZRV3 163 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 DGLUCYQ7Z3D6 616 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 AP3S1Q92572 193 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 UFD1Q92890 307 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 CRELD1Q96HD1 420 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 SH3GL3Q99963 347 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 TMEM121BQ9BXQ6 578 aaPredicted RBP7.69□□□□□ -1.18
PTPRD-204ENST00000397606 POLR2J2Q9GZM3 115 aaKnown RBP7.69□□□□□ -1.18
PTPRD-204ENST00000397606 SERHL2Q9H4I8 314 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 CDCP1Q9H5V8 836 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 SERHLQ9NQF3 203 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 CRNNQ9UBG3 495 aaPredicted RBP7.69□□□□□ -1.18
PTPRD-204ENST00000397606 HSPE1-MOB4S4R3N1 261 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 NCOR1O75376 2440 aa7.69□□□□□ -1.18
PTPRD-204ENST00000397606 GP1BAP07359 652 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 PEPDP12955 493 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF43P17038 809 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 FUT1P19526 365 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 MSX1P28360 303 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 LSM3P62310 102 aaKnown RBP7.68□□□□□ -1.18
PTPRD-204ENST00000397606 FOXC1Q12948 553 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 SPANXN2Q5MJ10 180 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 C16orf52Q8NHV5 167 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 TSEN15Q8WW01 171 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms