RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ZG16BQ96DA0 208 aa17.54■□□□□ 0.4
TSPAN4-204ENST00000397404 TMCO6Q96DC7 493 aa17.54■□□□□ 0.4
TSPAN4-204ENST00000397404 NXPE2Q96DL1 559 aa17.54■□□□□ 0.4
TSPAN4-204ENST00000397404 CIB1Q99828 191 aa17.54■□□□□ 0.4
TSPAN4-204ENST00000397404 ASCL3Q9NQ33 180 aa17.54■□□□□ 0.4
TSPAN4-204ENST00000397404 DLL3Q9NYJ7 618 aa17.54■□□□□ 0.4
TSPAN4-204ENST00000397404 ZNF223Q9UK11 482 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-204ENST00000397404 NPFFR2Q9Y5X5 522 aa17.54■□□□□ 0.4
TSPAN4-204ENST00000397404 PTPRZ1P23471 2315 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 SPEGQ15772 3267 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 SERINC4A6NH21 518 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 TNFRSF11BO00300 401 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 NME6O75414 186 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 REM1O75628 298 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 OR5F1O95221 314 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 IGKV1D-16P01601 117 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 MT-ND1P03886 318 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 RRM2P31350 389 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 ST3GAL3Q11203 375 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 MRPL2Q5T653 305 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 NUP54Q7Z3B4 507 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 PPP1R32Q7Z5V6 425 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 OFCC1Q8IZS5 231 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 OMA1Q96E52 524 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 CCNL2Q96S94 520 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 SECISBP2Q96T21 854 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 ZNF559Q9BR84 538 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 QRSL1Q9H0R6 528 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 TMCC3Q9ULS5 477 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 ORC6Q9Y5N6 252 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 CEP250Q9BV73 2442 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 PTPRBP23467 1997 aa17.53■□□□□ 0.4
TSPAN4-204ENST00000397404 ALG1L2C9J202 215 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 GADD45GO95257 159 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 ACADSP16219 412 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 CDH2P19022 906 aaPredicted RBP17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 RFX3P48380 749 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 SPIBQ01892 262 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 CHAF1BQ13112 559 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 CRTC2Q53ET0 693 aaPredicted RBP17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 PDZK1Q5T2W1 519 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 IZUMO2Q6UXV1 221 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 CBR4Q8N4T8 237 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 SLC5A8Q8N695 610 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 OR6T1Q8NGN1 323 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 ZNF597Q96LX8 424 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 FNDC11Q9BVV2 318 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 OSBPL11Q9BXB4 747 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 COQ10BQ9H8M1 238 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 RAB26Q9ULW5 256 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 YARS2Q9Y2Z4 477 aaKnown RBP17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 LYVE1Q9Y5Y7 322 aa17.52■□□□□ 0.4
TSPAN4-204ENST00000397404 UTS2O95399 124 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 SERPINA7P05543 415 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 H1F0P07305 194 aaKnown RBP17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 ANXA8P13928 327 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 RAD23AP54725 363 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 DAG1Q14118 895 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 NNATQ16517 81 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 MAPK14Q16539 360 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 LRRC36Q1X8D7 754 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 TMEM81Q6P7N7 255 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 OPN5Q6U736 354 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 DEF8Q6ZN54 512 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 STK32CQ86UX6 486 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 FER1L6-AS2Q96M78 137 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 TRIM2Q9C040 744 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 GPN2Q9H9Y4 310 aaPredicted RBP17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 FBXO34Q9NWN3 711 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 KCNE5Q9UJ90 142 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 AHCTF1Q8WYP5 2266 aa17.51■□□□□ 0.39
TSPAN4-204ENST00000397404 PRAMEF25A6NGN4 478 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 SAC3D1A6NKF1 404 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 FAAHO00519 579 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 EIF4E2O60573 245 aaKnown RBP17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 EPPINO95925 133 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 OTX2P32243 289 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 IFNGR2P38484 337 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 SLC6A8P48029 635 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 LIMS1P48059 325 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 TAS2R41P59536 307 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 MICAQ29983 383 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 RSPO4Q2I0M5 234 aaPredicted RBP17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 SWT1Q5T5J6 900 aaKnown RBP17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 ZNF613Q6PF04 617 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 TSEN54Q7Z6J9 526 aaKnown RBP17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 MRGPREQ86SM8 312 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 EPHX4Q8IUS5 362 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 GPALPP1Q8IXQ4 340 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 CLIP4Q8N3C7 705 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 LSMEM1Q8N8F7 131 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 FAM71CQ8NEG0 241 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 EFHD2Q96C19 240 aaPredicted RBP17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 RNF31Q96EP0 1072 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 ADOQ96SZ5 270 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 NMNAT1Q9HAN9 279 aaPredicted RBP17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 KRCC1Q9NPI7 259 aaPredicted RBP17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 ACER3Q9NUN7 267 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 P4HTMQ9NXG6 502 aa17.5■□□□□ 0.39
TSPAN4-204ENST00000397404 A4GNTQ9UNA3 340 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms