RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 IFNA8P32881 189 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 SSR2P43308 183 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 LGALSLQ3ZCW2 172 aaPredicted RBP12.98□□□□□ -0.33
NUP98-204ENST00000397004 MRM1Q6IN84 353 aaKnown RBP12.98□□□□□ -0.33
NUP98-204ENST00000397004 THSD4Q6ZMP0 1018 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 ZNF767PQ75MW2 155 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 SLC16A11Q8NCK7 471 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 OR6C4Q8NGE1 309 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 OTULINQ96BN8 352 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 ZNF681Q96N22 645 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 SLC38A2Q96QD8 506 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 CLEC4AQ9UMR7 237 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 TRANK1O15050 2925 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 PTPRSQ13332 1948 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 SHOXO15266 292 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 NOS1APO75052 506 aaPredicted RBP12.97□□□□□ -0.33
NUP98-204ENST00000397004 SC5DO75845 299 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 FGF18O76093 207 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 ADRB3P13945 408 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 MAKP20794 623 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 SSTR2P30874 369 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 ZP1P60852 638 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 PLAURQ03405 335 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 DPTQ07507 201 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 TRAM2Q15035 370 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 ARHGAP15Q53QZ3 475 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 METRNLQ641Q3 311 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 FBXL6Q8N531 539 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 MS4A6EQ96DS6 147 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 DHRS9Q9BPW9 319 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 ENTPD4Q9Y227 616 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 PLEKHM1Q9Y4G2 1056 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 A0A0G2JPF8 293 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 HNRNPCL2B2RXH8 293 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 HNRNPCL3B7ZW38 293 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 CASC3O15234 703 aaKnown RBP12.97□□□□□ -0.33
NUP98-204ENST00000397004 SLC22A5O76082 557 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 SOX30O94993 753 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 ADRB1P08588 477 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 HNRNPCL4P0DMR1 293 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 CERS1P27544 350 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 RFX3P48380 749 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 KHKP50053 298 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 ZNF136P52737 540 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 ERVFC1P60507 584 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 TMEM255AQ5JRV8 349 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 STPG1Q5TH74 334 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 FAM46CQ5VWP2 391 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 HBMQ6B0K9 141 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 SDE2Q6IQ49 451 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 LYPD4Q6UWN0 246 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 CCDC28AQ8IWP9 274 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 PFN4Q8NHR9 129 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 ING5Q8WYH8 240 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 PGLYRP3Q96LB9 341 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 CRISPLD2Q9H0B8 497 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 NCKAP1Q9Y2A7 1128 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 PPP2R1BP30154 601 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 DGCR2P98153 550 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 ZIC1Q15915 447 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 AMZ2Q86W34 360 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 ACOT4Q8N9L9 421 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 OR51Q1Q8NH59 317 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 CHFRQ96EP1 664 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 HYLS1Q96M11 299 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 DEFB118Q96PH6 123 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 SMAD5Q99717 465 aaKnown RBP12.97□□□□□ -0.33
NUP98-204ENST00000397004 ALG8Q9BVK2 526 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 SLC6A20Q9NP91 592 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 BABAM2Q9NXR7 383 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 TNFRSF10DQ9UBN6 386 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 SLC7A7Q9UM01 511 aa12.97□□□□□ -0.33
NUP98-204ENST00000397004 MUC22E2RYF6 1773 aaPredicted RBP12.97□□□□□ -0.33
NUP98-204ENST00000397004 A0A1W2PPK0 400 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 SLC9B1P1A6NJY1 282 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 EFCAB14O75071 495 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 FGBP02675 491 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 CCL5P13501 91 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 HCCSP53701 268 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 MAPK14Q16539 360 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 ST3GAL2Q16842 350 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 SFXN4Q6P4A7 337 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 LINC00471Q8N535 108 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 YIPF5Q969M3 257 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 NACC2Q96BF6 587 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 WDR89Q96FK6 387 aaPredicted RBP12.96□□□□□ -0.33
NUP98-204ENST00000397004 AHCYL2Q96HN2 611 aaKnown RBP12.96□□□□□ -0.33
NUP98-204ENST00000397004 JAM3Q9BX67 310 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 BTBD1Q9H0C5 482 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 MOSPD1Q9UJG1 213 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 BHLHE40O14503 412 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 RFPL3O75679 317 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 RGS9O75916 674 aaPredicted RBP12.96□□□□□ -0.33
NUP98-204ENST00000397004 MRPL3P09001 348 aaKnown RBP12.96□□□□□ -0.33
NUP98-204ENST00000397004 HTR2AP28223 471 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 CLCNKAP51800 687 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 POU4F3Q15319 338 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 DHCR24Q15392 516 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 NIPAL3Q6P499 406 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 FRRS1Q6ZNA5 592 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms