RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 GAS2L1Q99501 681 aaPredicted RBP15.59■□□□□ 0.09
NUP50-202ENST00000396096 LMF2Q9BU23 707 aaKnown RBP15.59■□□□□ 0.09
NUP50-202ENST00000396096 JAM3Q9BX67 310 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 UNC119BA6NIH7 251 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 LOC110117498-PIK3R3F6TDL0 507 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 WWP2O00308 870 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 PEX12O00623 359 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 CDC42EP2O14613 210 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 RDH16O75452 317 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 HTR1FP30939 366 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 RORCP51449 518 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 DNASE1L3Q13609 305 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 PLK5Q496M5 336 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.59■□□□□ 0.09
NUP50-202ENST00000396096 NXNL2Q5VZ03 156 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 STEAP3Q658P3 488 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 SYT13Q7L8C5 426 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 LAPTM4BQ86VI4 370 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 ZNF761Q86XN6 746 aaPredicted RBP15.59■□□□□ 0.09
NUP50-202ENST00000396096 GALNT6Q8NCL4 622 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 DOK4Q8TEW6 326 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 NELL2Q99435 816 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 LRRC61Q9BV99 259 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 BARHL1Q9BZE3 327 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 SMURF1Q9HCE7 757 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 CPNE5Q9HCH3 593 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 ABCB10Q9NRK6 738 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 STARD5Q9NSY2 213 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 C14orf105Q9NVL8 296 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 TXNL4BQ9NX01 149 aaKnown RBP15.59■□□□□ 0.09
NUP50-202ENST00000396096 NDRG2Q9UN36 371 aaKnown RBP15.59■□□□□ 0.09
NUP50-202ENST00000396096 SF3B6Q9Y3B4 125 aaKnown RBP15.59■□□□□ 0.09
NUP50-202ENST00000396096 CHURC1-FNTBB4DL54 471 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 BOLA2-SMG1P6H3BVE0 249 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 TBX1O43435 398 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 CHST10O43529 356 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 IL1AP01583 271 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 IGHA1P01876 353 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 S1PR1P21453 382 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 GABRA3P34903 492 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 C1orf61Q13536 156 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 SPANXN2Q5MJ10 180 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 WDR88Q6ZMY6 472 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 VWA5B2Q8N398 1253 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 OR9A4Q8NGU2 314 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 TMEM239Q8WW34 195 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 TM9SF4Q92544 642 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 ARHGAP9Q9BRR9 750 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 UBQLN3Q9H347 655 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 CLCA2Q9UQC9 943 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 TRAPPC4Q9Y296 219 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 PCDHGB6Q9Y5F9 930 aa15.58■□□□□ 0.08
NUP50-202ENST00000396096 SPIN1Q9Y657 262 aaPredicted RBP15.58■□□□□ 0.08
NUP50-202ENST00000396096 IQCMA0A1B0GVH7 501 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 GXYLT2A0PJZ3 443 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 BLACEA4D250 179 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 TSPAN19P0C672 248 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 ZGLP1P0C6A0 271 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 TYRP1P17643 537 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 DRD5P21918 477 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 COPZ1P61923 177 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 PLAURQ03405 335 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 ACSM1Q08AH1 577 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 ZNF155Q12901 538 aaPredicted RBP15.57■□□□□ 0.08
NUP50-202ENST00000396096 DSG2Q14126 1118 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 OR2G6Q5TZ20 316 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 ZNF613Q6PF04 617 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 FIGNL1Q6PIW4 674 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 DGAT2L6Q6ZPD8 337 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 MCATQ8IVS2 390 aaKnown RBP15.57■□□□□ 0.08
NUP50-202ENST00000396096 AVL9Q8NBF6 648 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 ITPKCQ96DU7 683 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 SAMD8Q96LT4 415 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 WDFY2Q96P53 400 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 MED18Q9BUE0 208 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 CHRDQ9H2X0 955 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 FN3KQ9H479 309 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 UCK1Q9HA47 277 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 SLC2A4RGQ9NR83 387 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 SIDT1Q9NXL6 827 aaKnown RBP15.57■□□□□ 0.08
NUP50-202ENST00000396096 CBLCQ9ULV8 474 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 TMEM5Q9Y2B1 443 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 MN1Q10571 1320 aaPredicted RBP15.57■□□□□ 0.08
NUP50-202ENST00000396096 SLC35F4A4IF30 521 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 H3BQ06 376 aaPredicted RBP15.57■□□□□ 0.08
NUP50-202ENST00000396096 CTDSP2O14595 271 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 SRPX2O60687 465 aaPredicted RBP15.57■□□□□ 0.08
NUP50-202ENST00000396096 KCNK2O95069 426 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 CH25HO95992 272 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 GKN3PP0CG01 181 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 CHRNB1P11230 501 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 SLC1A3P43003 542 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 GCGRP47871 477 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 IGLV3-21P80748 117 aaPredicted RBP15.57■□□□□ 0.08
NUP50-202ENST00000396096 RPL13AP3Q6NVV1 102 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 TMPRSS11FQ6ZWK6 438 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 GRAMD2AQ8IUY3 354 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 OR52R1Q8NGF1 315 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 KCNS3Q9BQ31 491 aa15.57■□□□□ 0.08
NUP50-202ENST00000396096 ZNF559Q9BR84 538 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms