RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 GALNSP34059 522 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 GGT2P36268 569 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 B4GALNT1Q00973 533 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 MAPK14Q16539 360 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SFT2D3Q587I9 215 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 FAM109BQ6ICB4 259 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 VTCN1Q7Z7D3 282 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 OR10H4Q8NGA5 316 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SETD6Q8TBK2 473 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ITFG2Q969R8 447 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF566Q969W8 418 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SENP5Q96HI0 755 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 C12orf10Q9HB07 376 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TCF7L1Q9HCS4 588 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 GPC6Q9Y625 555 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TNCP24821 2201 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 AGAP5A6NIR3 686 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CLDN24A6NM45 220 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 AIFM1O95831 613 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PIPP12273 146 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 IFI30P13284 250 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 STT3AP46977 705 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 NUBP1P53384 320 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SHC2P98077 582 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 MAP4K2Q12851 820 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CDK5R2Q13319 367 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TAF13Q15543 124 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 WDR74Q6RFH5 385 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 RPTNQ6XPR3 784 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 KRT74Q7RTS7 529 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 OR4K17Q8NGC6 315 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 OR2T11Q8NH01 316 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 FBXO27Q8NI29 283 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 RAB8BQ92930 207 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ISOC1Q96CN7 298 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TSSK6Q9BXA6 273 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 XKR8Q9H6D3 395 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 UBAP1Q9NZ09 502 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 USP36Q9P275 1121 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 LAMP5Q9UJQ1 280 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 FAM240BA0A1B0GVZ2 78 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ENTPD6O75354 484 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PIAS2O75928 621 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 HMGA2P52926 109 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CAMK1Q14012 370 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 NKAIN1Q4KMZ8 207 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 NXNL2Q5VZ03 156 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SMARCD3Q6STE5 483 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 RASSF6Q6ZTQ3 369 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 RNF44Q7L0R7 432 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 GALNT5Q7Z7M9 940 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ABTB1Q969K4 478 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 POTEKPQ9BYX7 375 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 NDUFAF4Q9P032 175 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 UPB1Q9UBR1 384 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SLC6A14Q9UN76 642 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PTGDR2Q9Y5Y4 395 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 RTCAO00442 366 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SCAMP1O15126 338 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 GJB3O75712 270 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 EGFP01133 1207 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 GRK5P34947 590 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 DAP3P51398 398 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 MRPL49Q13405 166 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 RAB12Q6IQ22 244 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF425Q6IV72 752 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ATCAYQ86WG3 371 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CLEC1AQ8NC01 280 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 LRRC46Q96FV0 321 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SECISBP2Q96T21 854 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 OR51I1Q9H343 314 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CPNE5Q9HCH3 593 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 KLHL21Q9UJP4 597 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CBLCQ9ULV8 474 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ATG4BQ9Y4P1 393 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 A6NIZ1 184 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 GABRG2P18507 467 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 AK4P27144 223 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CERS1P27544 350 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 EMP2P54851 167 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 RAP1BP61224 184 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 RAP1AP62834 184 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ADAM8P78325 824 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 FAM69AQ5T7M9 428 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 METAP1DQ6UB28 335 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PAQR7Q86WK9 346 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CHERPQ8IWX8 916 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SLC7A13Q8TCU3 470 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 VRK1Q99986 396 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CCDC32Q9BV29 185 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TPSD1Q9BZJ3 242 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 GLIPR2Q9H4G4 154 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PARPBPQ9NWS1 579 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 IKZF2Q9UKS7 526 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SLC6A5Q9Y345 797 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 MOSPD3O75425 235 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PRSS23O95084 383 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF888P0CJ79 500 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SNRPGP62308 76 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CBFBQ13951 182 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms