RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TMEM200CA6NKL6 621 aa18.8■□□□□ 0.6
VCPKMT-202ENST00000395860 ABCB7O75027 752 aa18.8■□□□□ 0.6
VCPKMT-202ENST00000395860 UTS2O95399 124 aa18.8■□□□□ 0.6
VCPKMT-202ENST00000395860 HPP00738 406 aa18.8■□□□□ 0.6
VCPKMT-202ENST00000395860 DNAJA1P31689 397 aaKnown RBP18.8■□□□□ 0.6
VCPKMT-202ENST00000395860 ARHGDIAP52565 204 aa18.8■□□□□ 0.6
VCPKMT-202ENST00000395860 CBR4Q8N4T8 237 aa18.8■□□□□ 0.6
VCPKMT-202ENST00000395860 WDR70Q9NW82 654 aa18.8■□□□□ 0.6
VCPKMT-202ENST00000395860 P4HTMQ9NXG6 502 aa18.8■□□□□ 0.6
VCPKMT-202ENST00000395860 FLRT3Q9NZU0 649 aa18.8■□□□□ 0.6
VCPKMT-202ENST00000395860 IL17BQ9UHF5 180 aa18.8■□□□□ 0.6
VCPKMT-202ENST00000395860 FBXL4Q9UKA2 621 aa18.8■□□□□ 0.6
VCPKMT-202ENST00000395860 PRDM4Q9UKN5 801 aa18.8■□□□□ 0.6
VCPKMT-202ENST00000395860 CNOT11Q9UKZ1 510 aaKnown RBP18.8■□□□□ 0.6
VCPKMT-202ENST00000395860 SCDO00767 359 aa18.79■□□□□ 0.6
VCPKMT-202ENST00000395860 SOCS2O14508 198 aa18.79■□□□□ 0.6
VCPKMT-202ENST00000395860 LIPCP11150 499 aa18.79■□□□□ 0.6
VCPKMT-202ENST00000395860 CYP4B1P13584 511 aa18.79■□□□□ 0.6
VCPKMT-202ENST00000395860 ICAM2P13598 275 aa18.79■□□□□ 0.6
VCPKMT-202ENST00000395860 CDH12P55289 794 aa18.79■□□□□ 0.6
VCPKMT-202ENST00000395860 CAMK2BQ13554 666 aa18.79■□□□□ 0.6
VCPKMT-202ENST00000395860 RTP5Q14D33 572 aa18.79■□□□□ 0.6
VCPKMT-202ENST00000395860 NPTX1Q15818 432 aa18.79■□□□□ 0.6
VCPKMT-202ENST00000395860 TMEM179BQ7Z7N9 219 aa18.79■□□□□ 0.6
VCPKMT-202ENST00000395860 MRGPREQ86SM8 312 aa18.79■□□□□ 0.6
VCPKMT-202ENST00000395860 KBTBD2Q8IY47 623 aa18.79■□□□□ 0.6
VCPKMT-202ENST00000395860 OIT3Q8WWZ8 545 aa18.79■□□□□ 0.6
VCPKMT-202ENST00000395860 SLC29A1Q99808 456 aa18.79■□□□□ 0.6
VCPKMT-202ENST00000395860 TNFRSF11BO00300 401 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 AP3D1O14617 1153 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 ICOSLGO75144 302 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 OXSR1O95747 527 aaPredicted RBP18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 ZNF26P17031 533 aaPredicted RBP18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 FPR1P21462 350 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 TGIF1Q15583 401 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 ZSWIM7Q19AV6 140 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 OTUD3Q5T2D3 398 aaPredicted RBP18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 PPP4R4Q6NUP7 873 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 SHQ1Q6PI26 577 aaKnown RBP18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 ZNF605Q86T29 641 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 STK32CQ86UX6 486 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 HIPK1Q86Z02 1210 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 CMIPQ8IY22 773 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 SLC22A8Q8TCC7 542 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 EPYCQ99645 322 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 EVA1AQ9H8M9 152 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 ZBTB20Q9HC78 741 aaPredicted RBP18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 RHCGQ9UBD6 479 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 LYVE1Q9Y5Y7 322 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 PTPRZ1P23471 2315 aaPredicted RBP18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 PCSK5Q92824 1860 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 SERINC4A6NH21 518 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 OR6C70A6NIJ9 312 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 SEMA7AO75326 666 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 PPM1BO75688 479 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 GADD45GO95257 159 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 NADKO95544 446 aaPredicted RBP18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 TBXA2RP21731 343 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 AQP4P55087 323 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 KLHL26Q53HC5 615 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 DESI1Q6ICB0 168 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 HS3ST5Q8IZT8 346 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 OR52J3Q8NH60 311 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 PRRC1Q96M27 445 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 ZNF184Q99676 751 aaPredicted RBP18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 C8orf4Q9NR00 106 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 ACAD8Q9UKU7 415 aa18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 MAGED1Q9Y5V3 778 aaPredicted RBP18.78■□□□□ 0.6
VCPKMT-202ENST00000395860 CEP250Q9BV73 2442 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 MASP2O00187 686 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 EI24O14681 340 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 FFAR1O14842 300 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 ZNF354AO60765 605 aaPredicted RBP18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 UGT2B11O75310 529 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 OR2J2O76002 312 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 RASAL1O95294 804 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 GKN3PP0CG01 181 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 HOXC5Q00444 222 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 PIN1Q13526 163 aaPredicted RBP18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 TBPL2Q6SJ96 375 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 RANBP3LQ86VV4 465 aaPredicted RBP18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 GRAMD2AQ8IUY3 354 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 PACRGLQ8N7B6 248 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 CNOT9Q92600 299 aaKnown RBP18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 MCHR1Q99705 422 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 FNDC11Q9BVV2 318 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 ACER3Q9NUN7 267 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 A4GNTQ9UNA3 340 aa18.77■□□□□ 0.6
VCPKMT-202ENST00000395860 BCAS1O75363 584 aaPredicted RBP18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 CSTAP01040 98 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 NAGAP17050 411 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 TMED10P49755 219 aaKnown RBP18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 TAS2R41P59536 307 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 FOXD4Q12950 439 aaPredicted RBP18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 ATP1A4Q13733 1029 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 EFR3AQ14156 821 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 COLEC12Q5KU26 742 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 MAGEE2Q8TD90 523 aaPredicted RBP18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 ADAMTS17Q8TE56 1095 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 PHF10Q8WUB8 498 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms