RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 LIMS1P48059 325 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 VSNL1P62760 191 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 LTB4RQ15722 352 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 MSS51Q4VC12 460 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 TRMT10BQ6PF06 316 aaKnown RBP12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 RINLQ6ZS11 566 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 ESPNLQ6ZVH7 1005 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 P2RY8Q86VZ1 359 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 WDR75Q8IWA0 830 aaKnown RBP12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 TUSC5Q8IXB3 177 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 KLHL7Q8IXQ5 586 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 GTPBP8Q8N3Z3 284 aaPredicted RBP12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 MREGQ8N565 214 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 ZNF418Q8TF45 676 aaPredicted RBP12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 DUSP19Q8WTR2 217 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 MTBPQ96DY7 904 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 INPP5KQ9BT40 448 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 MYOZ1Q9NP98 299 aaPredicted RBP12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 DMGDHQ9UI17 866 aaKnown RBP12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 ING1Q9UK53 422 aaPredicted RBP12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 PCDHB10Q9UN67 800 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 ABCG2Q9UNQ0 655 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 HEATR1Q9H583 2144 aaKnown RBP12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 FAM95CA0A1B0GW59 222 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 C7orf72A4D263 438 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 H0YIV9 168 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 TNFSF11O14788 317 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 IL12BP29460 328 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 FEN1P39748 380 aaKnown RBP12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 RAC1P63000 192 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 GUCY2DQ02846 1103 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 STK11Q15831 433 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 ZNF239Q16600 458 aaKnown RBP12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 IQCCQ4KMZ1 466 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 ZNF628Q5EBL2 1059 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 TMEM201Q5SNT2 666 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 LGSNQ5TDP6 509 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 GTF2IRD2BQ6EKJ0 949 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 SLC22A25Q6T423 547 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 TMEM108Q6UXF1 575 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 GTF2IRD2Q86UP8 949 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 PPIL6Q8IXY8 311 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 CNPY4Q8N129 248 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 SPATA6LQ8N4H0 392 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 ZNF540Q8NDQ6 660 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 WDR20Q8TBZ3 569 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 ZNF675Q8TD23 568 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 AENQ8WTP8 325 aaKnown RBP12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 KCTD4Q8WVF5 259 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 MUCL1Q96DR8 90 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 CNRIP1Q96F85 164 aaPredicted RBP12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 ANKRA2Q9H9E1 313 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 POPDC3Q9HBV1 291 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 PCDHA9Q9Y5H5 950 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 FKBP7Q9Y680 259 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 PMF1-BGLAPU3KQ54 211 aa12.01□□□□□ -0.49
VCPKMT-201ENST00000395859 OR5H1A6NKK0 313 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 SEMA3DO95025 777 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 BMP4P12644 408 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 CD1DP15813 335 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 CSNK2A2P19784 350 aaPredicted RBP12□□□□□ -0.49
VCPKMT-201ENST00000395859 IGHV1-2P23083 117 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 APOBEC3AP31941 199 aaPredicted RBP12□□□□□ -0.49
VCPKMT-201ENST00000395859 OR3A2P47893 321 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 CHRNB3Q05901 458 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 STX5Q13190 355 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 RNPS1Q15287 305 aaKnown RBP12□□□□□ -0.49
VCPKMT-201ENST00000395859 PPP1R7Q15435 360 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 CROCCP2Q86T23 111 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 NUP43Q8NFH3 380 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 UBTD2Q8WUN7 234 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 ERP27Q96DN0 273 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 NAT9Q9BTE0 207 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 SDHAF3Q9NRP4 125 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 FAM120CQ9NX05 1096 aaKnown RBP12□□□□□ -0.49
VCPKMT-201ENST00000395859 STOML1Q9UBI4 398 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 WBP11Q9Y2W2 641 aaKnown RBP12□□□□□ -0.49
VCPKMT-201ENST00000395859 SPEF1Q9Y4P9 236 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 PCDHGA11Q9Y5H2 935 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 SLC25A15Q9Y619 301 aa12□□□□□ -0.49
VCPKMT-201ENST00000395859 GOLGA6L10A6NI86 522 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 K7EPI3 171 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 FOXE1O00358 373 aaPredicted RBP11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 RGS9O75916 674 aaPredicted RBP11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 OPN1LWP04000 364 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 YES1P07947 543 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 PABPC4LP0CB38 370 aaKnown RBP11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 MRPS22P82650 360 aaKnown RBP11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 PSG6Q00889 435 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 CALCOCO2Q13137 446 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 HBMQ6B0K9 141 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 APOOLQ6UXV4 268 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 GOLGA6L1Q8N7Z2 621 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 OSTF1Q92882 214 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 SRXN1Q9BYN0 137 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 BCO1Q9HAY6 547 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 ESM1Q9NQ30 184 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 PRSS50Q9UI38 385 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 ADAM29Q9UKF5 820 aa11.99□□□□□ -0.49
VCPKMT-201ENST00000395859 POU2F3Q9UKI9 436 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms