RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TGM5O43548 720 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 SLC1A3P43003 542 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 BDH1Q02338 343 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 KLF9Q13886 244 aaPredicted RBP17.66■□□□□ 0.42
HOXC6-202ENST00000394331 CCDC157Q569K6 752 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 LRRC56Q8IYG6 542 aaPredicted RBP17.66■□□□□ 0.42
HOXC6-202ENST00000394331 SAMD12Q8N8I0 201 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 OR52N1Q8NH53 320 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 HAVCR2Q8TDQ0 301 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 CLP1Q92989 425 aaKnown RBP17.66■□□□□ 0.42
HOXC6-202ENST00000394331 MED11Q9P086 117 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 RHCGQ9UBD6 479 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 TRABD2BA6NFA1 517 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 POM121CA8CG34 1229 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 RGS9O75916 674 aaPredicted RBP17.65■□□□□ 0.42
HOXC6-202ENST00000394331 SLCO2B1O94956 709 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 ARAFP10398 606 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 LIM2P55344 173 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 SEC61A1P61619 476 aaKnown RBP17.65■□□□□ 0.42
HOXC6-202ENST00000394331 CDK5Q00535 292 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 DEFA5Q01523 94 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 MC2RQ01718 297 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 LRRC73Q5JTD7 316 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 TMUB2Q71RG4 321 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 PGAP1Q75T13 922 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 CHST14Q8NCH0 376 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 FAIM2Q9BWQ8 316 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 SLC46A2Q9BY10 475 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 MTG2Q9H4K7 406 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 TBC1D17Q9HA65 648 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 OR10H3O60404 316 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 LILRB3O75022 631 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 GJA1P17302 382 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 MTNR1AP48039 350 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 SFRP5Q5T4F7 317 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 VASNQ6EMK4 673 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 Q6ZVU0 165 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 POGLUT1Q8NBL1 392 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 PAWRQ96IZ0 340 aaKnown RBP17.65■□□□□ 0.42
HOXC6-202ENST00000394331 DDX31Q9H8H2 851 aaKnown RBP17.65■□□□□ 0.42
HOXC6-202ENST00000394331 WASH3PC4AMC7 463 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 CTDSPLO15194 276 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 MTX2O75431 263 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 S100A8P05109 93 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 HSD3B1P14060 373 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 IDSP22304 550 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 HSD3B2P26439 372 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 VIPR1P32241 457 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 SMIM11AP58511 58 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 ACSM2AQ08AH3 577 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 ZNF155Q12901 538 aaPredicted RBP17.65■□□□□ 0.42
HOXC6-202ENST00000394331 SMAD2Q15796 467 aaKnown RBP17.65■□□□□ 0.42
HOXC6-202ENST00000394331 ACSM2BQ68CK6 577 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 GSG1LQ6UXU4 331 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 DEF8Q6ZN54 512 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 MRGPREQ86SM8 312 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 THOC6Q86W42 341 aaKnown RBP17.65■□□□□ 0.42
HOXC6-202ENST00000394331 SFT2D1Q8WV19 159 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 BHLHE41Q9C0J9 482 aaPredicted RBP17.65■□□□□ 0.42
HOXC6-202ENST00000394331 WDR26Q9H7D7 661 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 EXOSC3Q9NQT5 275 aaKnown RBP17.65■□□□□ 0.42
HOXC6-202ENST00000394331 GSN-AS1Q9NRJ2 163 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 SPATA6Q9NWH7 488 aaPredicted RBP17.65■□□□□ 0.42
HOXC6-202ENST00000394331 EDARQ9UNE0 448 aa17.65■□□□□ 0.42
HOXC6-202ENST00000394331 COL4A6Q14031 1691 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 KDM4BO94953 1096 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 HIST1H2ABP04908 130 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 SOX18P35713 384 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 HTR4Q13639 388 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 HIST3H2AQ7L7L0 130 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 ZFP41Q8N8Y5 198 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 CDC26Q8NHZ8 85 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 GNPDA2Q8TDQ7 276 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 HIST1H2ACQ93077 130 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 SCAMP4Q969E2 229 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 DMRTA2Q96SC8 542 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 JAM3Q9BX67 310 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 MGAT4CQ9UBM8 478 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 GULP1Q9UBP9 304 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 ERVK-19Q9WJR5 959 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 DENND4AQ7Z401 1863 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 FZD7O75084 574 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 RAB3BP20337 219 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 PPM1AP35813 382 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 GIPRP48546 466 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 SNTB2Q13425 540 aaKnown RBP17.64■□□□□ 0.41
HOXC6-202ENST00000394331 FGL2Q14314 439 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 SWI5Q1ZZU3 235 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 DEFB115Q30KQ5 88 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 ELFN2Q5R3F8 820 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 FCRLBQ6BAA4 426 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 TMCO2Q7Z6W1 182 aaPredicted RBP17.64■□□□□ 0.41
HOXC6-202ENST00000394331 TPRA1Q86W33 373 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 TMEM25Q86YD3 366 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 PXT1Q8NFP0 134 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 SETD7Q8WTS6 366 aaKnown RBP17.64■□□□□ 0.41
HOXC6-202ENST00000394331 ELP4Q96EB1 424 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 SMG9Q9H0W8 520 aaKnown RBP17.64■□□□□ 0.41
HOXC6-202ENST00000394331 ACAD8Q9UKU7 415 aa17.64■□□□□ 0.41
HOXC6-202ENST00000394331 A0A0B4J203 849 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms