RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CDC14CA4D256 554 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 CDC42EP2O14613 210 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 FOXS1O43638 330 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 ATP1B1P05026 303 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 PRKAR1BP31321 381 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 FZD5Q13467 585 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 OR1Q1Q15612 314 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 TBCEQ15813 527 aaPredicted RBP10.34□□□□□ -0.75
TCOF1-203ENST00000394269 NDUFA9Q16795 377 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 ZNF829Q3KNS6 432 aaPredicted RBP10.34□□□□□ -0.75
TCOF1-203ENST00000394269 OR2G6Q5TZ20 316 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 C1orf94Q6P1W5 598 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 ZNF619Q8N2I2 560 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 C20orf141Q9NUB4 165 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 PLCXD1Q9NUJ7 323 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 H2AFY2Q9P0M6 372 aaPredicted RBP10.34□□□□□ -0.75
TCOF1-203ENST00000394269 FAM86C2PA6NEL3 165 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 TMEM150CB9EJG8 249 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 TGFBR3LH3BV60 316 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 OR2B3O76000 313 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 AGR2O95994 175 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 RPLP0P05388 317 aaKnown RBP10.34□□□□□ -0.75
TCOF1-203ENST00000394269 TGFBR2P37173 567 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 RPS7P62081 194 aaKnown RBP10.34□□□□□ -0.75
TCOF1-203ENST00000394269 COX10Q12887 443 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 DOC2BQ14184 412 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 OR51Q1Q8NH59 317 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 GNPDA2Q8TDQ7 276 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 GATAD2BQ8WXI9 593 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 EFHD2Q96C19 240 aaPredicted RBP10.34□□□□□ -0.75
TCOF1-203ENST00000394269 TMEM80Q96HE8 168 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 GAL3ST4Q96RP7 486 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 KCNS3Q9BQ31 491 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 MED20Q9H944 212 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 MARCH7Q9H992 704 aa10.34□□□□□ -0.75
TCOF1-203ENST00000394269 CPED1A4D0V7 1026 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 FAM221BA6H8Z2 402 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 RGS5O15539 181 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 CBX7O95931 251 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 DHPSP49366 369 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-203ENST00000394269 INAQ16352 499 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 SYT14P1Q58G82 188 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 UBE2UQ5VVX9 321 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 ACOT11Q8WXI4 607 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-203ENST00000394269 BORCS5Q969J3 196 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 TCTN2Q96GX1 697 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 SLC38A2Q96QD8 506 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 LMF1Q96S06 567 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 SLC7A5P2Q9GIP4 190 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 ZC3H12DA2A288 527 aaKnown RBP10.33□□□□□ -0.76
TCOF1-203ENST00000394269 PLOD3O60568 738 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 KCNK2O95069 426 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 IGLV3-19P01714 112 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 TP53P04637 393 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-203ENST00000394269 SLC35E2P0CK97 266 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 NOS3P29474 1203 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 IDUAP35475 653 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 SPHARQ15513 63 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 POMZP3Q6PJE2 187 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 PRR22Q8IZ63 422 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 FCGR1BQ92637 280 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 SH3YL1Q96HL8 342 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-203ENST00000394269 RNF215Q9Y6U7 377 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 DSPPQ9NZW4 1301 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 TRAV27A0A087WT01 109 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 A0A1W2PR77 199 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 SH3D21A4FU49 640 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 ARRDC5A6NEK1 342 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 SYT5O00445 386 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 ARHGAP33O14559 1287 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 DBIP07108 87 aaKnown RBP10.33□□□□□ -0.76
TCOF1-203ENST00000394269 HPGDP15428 266 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 MYL12AP19105 171 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 HTR2AP28223 471 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 GCGRP47871 477 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 CXCL12P48061 93 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 SLC9A3P48764 834 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 CSTF1Q05048 431 aaKnown RBP10.33□□□□□ -0.76
TCOF1-203ENST00000394269 COL19A1Q14993 1142 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 HEPHL1Q6MZM0 1159 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 RCBTB1Q8NDN9 531 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 BBS1Q8NFJ9 593 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 OR4F15Q8NGB8 312 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 TP53INP1Q96A56 240 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 RNFT2Q96EX2 444 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 ZNF582Q96NG8 517 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-203ENST00000394269 ARHGDIGQ99819 225 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-203ENST00000394269 NRSN2Q9GZP1 204 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 ENKD1Q9H0I2 346 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 OR51V1Q9H2C8 321 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 NECTIN3Q9NQS3 549 aa10.33□□□□□ -0.76
TCOF1-203ENST00000394269 PRRC2CQ9Y520 2896 aaKnown RBP10.33□□□□□ -0.76
TCOF1-203ENST00000394269 PCDH15Q96QU1 1955 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 BCAT2O15382 392 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-203ENST00000394269 SRPX2O60687 465 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-203ENST00000394269 GSTM3P21266 225 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 CD1CP29017 333 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 PSG6Q00889 435 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 WDR88Q6ZMY6 472 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms