RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 MORN1Q5T089 497 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 CCNJQ5T5M9 372 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 C3P1Q6ZMU1 363 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 KCTD12Q96CX2 325 aaKnown RBP15.31■□□□□ 0.04
PHTF1-205ENST00000393357 METTL2AQ96IZ6 378 aaKnown RBP15.31■□□□□ 0.04
PHTF1-205ENST00000393357 C4orf36Q96KX1 117 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 FAM171A2A8MVW0 826 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 GALTP07902 379 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 SSR2P43308 183 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 MAPK9P45984 424 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 FKBP1BP68106 108 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 ARHGAP15Q53QZ3 475 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 OTPQ5XKR4 325 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 ZNF322Q6U7Q0 402 aaPredicted RBP15.31■□□□□ 0.04
PHTF1-205ENST00000393357 OR8K3Q8NH51 312 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 SCLYQ96I15 445 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 BRF2Q9HAW0 419 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 C12orf10Q9HB07 376 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 TMEM138Q9NPI0 162 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 KCND3Q9UK17 655 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 EXOSC1Q9Y3B2 195 aaKnown RBP15.31■□□□□ 0.04
PHTF1-205ENST00000393357 YIPF1Q9Y548 306 aa15.31■□□□□ 0.04
PHTF1-205ENST00000393357 TOR1AO14656 332 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 MMP20O60882 483 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 APEHP13798 732 aaKnown RBP15.3■□□□□ 0.04
PHTF1-205ENST00000393357 COL28A1Q2UY09 1125 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 CXXC5Q7LFL8 322 aaKnown RBP15.3■□□□□ 0.04
PHTF1-205ENST00000393357 TMEM25Q86YD3 366 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 RFLNBQ8N5W9 214 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 OR5W2Q8NH69 310 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 LRIG1Q96JA1 1093 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 P2RX2Q9UBL9 471 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 HRH3Q9Y5N1 445 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 SCN8AQ9UQD0 1980 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 OR5K3A6NET4 321 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 RGS9O75916 674 aaPredicted RBP15.3■□□□□ 0.04
PHTF1-205ENST00000393357 CLTBP09497 229 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 MINDY4Q4G0A6 757 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 EOGTQ5NDL2 527 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 TMEM201Q5SNT2 666 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 CDC73Q6P1J9 531 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 LIX1LQ8IVB5 337 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 TET1Q8NFU7 2136 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 KIAA1143Q96AT1 154 aaPredicted RBP15.3■□□□□ 0.04
PHTF1-205ENST00000393357 OTUB2Q96DC9 234 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 TM7SF3Q9NS93 570 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 NLRC5Q86WI3 1866 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 TMEM129A0AVI4 362 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 TRABD2BA6NFA1 517 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 SGK494L7N484 410 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 CDC42EP2O14613 210 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 EFCAB14O75071 495 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 ELFN1P0C7U0 828 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 SAGP10523 405 aaPredicted RBP15.3■□□□□ 0.04
PHTF1-205ENST00000393357 HOXB3P14651 431 aaPredicted RBP15.3■□□□□ 0.04
PHTF1-205ENST00000393357 ADH7P40394 386 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 PSMA6P60900 246 aaKnown RBP15.3■□□□□ 0.04
PHTF1-205ENST00000393357 ID2Q02363 134 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 GSG1Q2KHT4 349 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 VASNQ6EMK4 673 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 OR4N5Q8IXE1 308 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 PDCD1LG2Q9BQ51 273 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 ZNF436Q9C0F3 470 aaPredicted RBP15.3■□□□□ 0.04
PHTF1-205ENST00000393357 IRAK3Q9Y616 596 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 SESN1Q9Y6P5 492 aa15.3■□□□□ 0.04
PHTF1-205ENST00000393357 OTOFQ9HC10 1997 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 hCG_1807616A0A1W2PRN6 198 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 NRG2O14511 850 aaPredicted RBP15.29■□□□□ 0.04
PHTF1-205ENST00000393357 PDCD5O14737 125 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 SLC19A2O60779 497 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 TRIM3O75382 744 aaPredicted RBP15.29■□□□□ 0.04
PHTF1-205ENST00000393357 SOX30O94993 753 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 C1orf105O95561 183 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 MPC1LP0DKB6 136 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 ATP5A1P25705 553 aaKnown RBP15.29■□□□□ 0.04
PHTF1-205ENST00000393357 GDNFP39905 211 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 GAS1P54826 345 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 LRRC28Q86X40 367 aaPredicted RBP15.29■□□□□ 0.04
PHTF1-205ENST00000393357 TBC1D19Q8N5T2 526 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 SLAIN1Q8ND83 568 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 SCMH1Q96GD3 660 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 ZC3HAV1LQ96H79 300 aaKnown RBP15.29■□□□□ 0.04
PHTF1-205ENST00000393357 ZSWIM3Q96MP5 696 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 OR1F2PQ96R84 312 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 STK25O00506 426 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 EPPINO95925 133 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 CXCL2P19875 107 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 FLT3LGP49771 235 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 SLC36A2Q495M3 483 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 ACSM3Q53FZ2 586 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 LRFN4Q6PJG9 635 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 NXPE4Q6UWF7 544 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 APOOLQ6UXV4 268 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.29■□□□□ 0.04
PHTF1-205ENST00000393357 ACBD7Q8N6N7 88 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 ARIH2OSQ8N7S6 290 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 KLHL15Q96M94 604 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 C20orf85Q9H1P6 137 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 CYSLTR2Q9NS75 346 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 LSM7Q9UK45 103 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms