RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 TRAM2Q15035 370 aa16.15■□□□□ 0.18
MBD4-202ENST00000393278 ZSWIM7Q19AV6 140 aa16.15■□□□□ 0.18
MBD4-202ENST00000393278 PGBD2Q6P3X8 592 aa16.15■□□□□ 0.18
MBD4-202ENST00000393278 ZNF614Q8N883 585 aa16.15■□□□□ 0.18
MBD4-202ENST00000393278 SETD9Q8NE22 299 aa16.15■□□□□ 0.18
MBD4-202ENST00000393278 GAL3ST4Q96RP7 486 aa16.15■□□□□ 0.18
MBD4-202ENST00000393278 YTHDF1Q9BYJ9 559 aaKnown RBP16.15■□□□□ 0.18
MBD4-202ENST00000393278 ULBP3Q9BZM4 244 aa16.15■□□□□ 0.18
MBD4-202ENST00000393278 ING2Q9H160 280 aa16.15■□□□□ 0.18
MBD4-202ENST00000393278 WDR54Q9H977 334 aa16.15■□□□□ 0.18
MBD4-202ENST00000393278 ENOPH1Q9UHY7 261 aa16.15■□□□□ 0.18
MBD4-202ENST00000393278 NXT1Q9UKK6 140 aaKnown RBP16.15■□□□□ 0.18
MBD4-202ENST00000393278 GMPPBQ9Y5P6 360 aa16.15■□□□□ 0.18
MBD4-202ENST00000393278 IGHV3-20A0A0C4DH32 117 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 SAGE2PA6NJ88 616 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 PRKNO60260 465 aaPredicted RBP16.14■□□□□ 0.18
MBD4-202ENST00000393278 IL33O95760 270 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 KLK3P07288 261 aaPredicted RBP16.14■□□□□ 0.18
MBD4-202ENST00000393278 PRG2P13727 222 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 SLC5A2P31639 672 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 UGT2B15P54855 530 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 CD47Q08722 323 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 CCDC157Q569K6 752 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 KLHL17Q6TDP4 642 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 SLC29A4Q7RTT9 530 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 OR4K5Q8NGD3 323 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 FBLIM1Q8WUP2 373 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 CNOT9Q92600 299 aaKnown RBP16.14■□□□□ 0.18
MBD4-202ENST00000393278 SLC38A4Q969I6 547 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 SLC41A3Q96GZ6 507 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 HRASLS5Q96KN8 279 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 CRB3Q9BUF7 120 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 DGCR6LQ9BY27 220 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 MRPS26Q9BYN8 205 aaKnown RBP16.14■□□□□ 0.18
MBD4-202ENST00000393278 STRADBQ9C0K7 418 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 WWTR1Q9GZV5 400 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 TESQ9UGI8 421 aaKnown RBP16.14■□□□□ 0.18
MBD4-202ENST00000393278 LOXL2Q9Y4K0 774 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 HSPE1-MOB4S4R3N1 261 aa16.14■□□□□ 0.18
MBD4-202ENST00000393278 A0A087WUU8 490 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 TRIM64A6NGJ6 449 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 C4orf47A7E2U8 309 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 TMX2-CTNND1H3BSU7 103 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 TO15178 435 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 THY1P04216 161 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 GKN3PP0CG01 181 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 ITIH1P19827 911 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 HTR2AP28223 471 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 ELK4P28324 431 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 TCF15Q12870 199 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 APOFQ13790 326 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 CSRP2Q16527 193 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 CTU2Q2VPK5 515 aaKnown RBP16.14■□□□□ 0.17
MBD4-202ENST00000393278 CDCP2Q5VXM1 449 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 HLA-DQA1Q5Y7H0 255 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 TMEM205Q6UW68 189 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 GDF7Q7Z4P5 450 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 CMIPQ8IY22 773 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 NFAM1Q8NET5 270 aaPredicted RBP16.14■□□□□ 0.17
MBD4-202ENST00000393278 TOR1AIP2Q8NFQ8 470 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 OR4C3Q8NH37 302 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 OIT3Q8WWZ8 545 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 EFHD2Q96C19 240 aaPredicted RBP16.14■□□□□ 0.17
MBD4-202ENST00000393278 APOL4Q9BPW4 351 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 UCK2Q9BZX2 261 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 SEMA4CQ9C0C4 833 aa16.14■□□□□ 0.17
MBD4-202ENST00000393278 DNAJB12Q9NXW2 375 aaKnown RBP16.14■□□□□ 0.17
MBD4-202ENST00000393278 MRTO4Q9UKD2 239 aaKnown RBP16.14■□□□□ 0.17
MBD4-202ENST00000393278 PPIEQ9UNP9 301 aaKnown RBP16.14■□□□□ 0.17
MBD4-202ENST00000393278 CACNA1HO95180 2353 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 WDR87Q6ZQQ6 2873 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 A6NHS1 94 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 ETV5P41161 510 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 RAB15P59190 212 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 ESRRGP62508 458 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 IL5RAQ01344 420 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 FAM198BQ6UWH4 519 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 SLCO6A1Q86UG4 719 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 ZNF441Q8N8Z8 693 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 C17orf47Q8NEP4 570 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 B3GNT7Q8NFL0 401 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 TSPAN14Q8NG11 270 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 SLC35B4Q969S0 331 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 WDR77Q9BQA1 342 aaPredicted RBP16.13■□□□□ 0.17
MBD4-202ENST00000393278 MESP1Q9BRJ9 268 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 HOXD1Q9GZZ0 328 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 PARD6AQ9NPB6 346 aa16.13■□□□□ 0.17
MBD4-202ENST00000393278 GPN3Q9UHW5 284 aaPredicted RBP16.13■□□□□ 0.17
MBD4-202ENST00000393278 TRAPPC13A5PLN9 417 aa16.12■□□□□ 0.17
MBD4-202ENST00000393278 DPPA5A6NC42 116 aa16.12■□□□□ 0.17
MBD4-202ENST00000393278 SERINC4A6NH21 518 aa16.12■□□□□ 0.17
MBD4-202ENST00000393278 LRP3O75074 770 aa16.12■□□□□ 0.17
MBD4-202ENST00000393278 SMNDC1O75940 238 aaKnown RBP eCLIP16.12■□□□□ 0.174e-6■■■■□ 21.7
MBD4-202ENST00000393278 MMP11P24347 488 aa16.12■□□□□ 0.17
MBD4-202ENST00000393278 LCN1P31025 176 aa16.12■□□□□ 0.17
MBD4-202ENST00000393278 GGT2P36268 569 aa16.12■□□□□ 0.17
MBD4-202ENST00000393278 NR0B1P51843 470 aaKnown RBP16.12■□□□□ 0.17
MBD4-202ENST00000393278 GTF2A1P52655 376 aaPredicted RBP16.12■□□□□ 0.17
MBD4-202ENST00000393278 TARDBPQ13148 414 aaKnown RBP eCLIP16.12■□□□□ 0.17
MBD4-202ENST00000393278 OR1Q1Q15612 314 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms