RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 F8P00451 2351 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 SPG11Q96JI7 2443 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 POLQO75417 2590 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 ANKHD1Q8IWZ3 2542 aaKnown RBP12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 B4DXG7 233 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 H3BML4 177 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 PIP5K1BO14986 540 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 SCAMP2O15127 329 aaKnown RBP12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 OXSR1O95747 527 aaPredicted RBP12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 CHRNGP07510 517 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 FOSL1P15407 271 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 ADH6P28332 368 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 CD79BP40259 229 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 EIF1P41567 113 aaKnown RBP12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 KIR2DL2P43627 348 aaPredicted RBP12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 SUCLG1P53597 346 aaKnown RBP12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 CLDN15P56746 228 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 RAC1P63000 192 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 POU6F2P78424 691 aaPredicted RBP12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 TP53BP2Q13625 1128 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 KEAP1Q14145 624 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 ZNF385BQ569K4 471 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 XKR7Q5GH72 579 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 EXOSC6Q5RKV6 272 aaKnown RBP12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 C6orf136Q5SQH8 315 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 ANKRD26P1Q6NSI1 321 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 PAMR1Q6UXH9 720 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 APOOLQ6UXV4 268 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 EXOC3L1Q86VI1 746 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 TGIF2LYQ8IUE0 185 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 COX18Q8N8Q8 333 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 CNEP1R1Q8N9A8 125 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 ZNF527Q8NB42 609 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 SLC16A11Q8NCK7 471 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 OR56A1Q8NGH5 318 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 OR2W6PQ8NHA6 318 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 NRGNQ92686 78 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 CAVIN3Q969G5 261 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 ZNF845Q96IR2 970 aaPredicted RBP12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 TMUB1Q9BVT8 246 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 PINK1Q9BXM7 581 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 PRRG4Q9BZD6 226 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 PLEKHF2Q9H8W4 249 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 PLSCR4Q9NRQ2 329 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 ZCCHC3Q9NUD5 404 aaKnown RBP12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 FLRT3Q9NZU0 649 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 SLC17A7Q9P2U7 560 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 PTGDR2Q9Y5Y4 395 aa12.25□□□□□ -0.45
TRBV4-1-201ENST00000390357 DUXAA6NLW8 204 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 H3BNH8 94 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 CTIFO43310 598 aaKnown RBP12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 PEX11AO75192 247 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 SMNDC1O75940 238 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 SLU7O95391 586 aaKnown RBP12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 IGKV1D-16P01601 117 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 HRGP04196 525 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 HMGN2P05204 90 aaKnown RBP12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 BPGMP07738 259 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 ACP2P11117 423 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 ATP6V1C1P21283 382 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 CCT3P49368 545 aaKnown RBP12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 ZNF41P51814 821 aaPredicted RBP12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 VSNL1P62760 191 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 PON3Q15166 354 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 DUSP5Q16690 384 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 CDC73Q6P1J9 531 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 ESPNLQ6ZVH7 1005 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 FAM214BQ7L5A3 538 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 SZRD1Q7Z422 152 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 CROCCP2Q86T23 111 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 NUDCD3Q8IVD9 361 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 GTPBP8Q8N3Z3 284 aaPredicted RBP12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 B4GALNT2Q8NHY0 566 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 ADAMTS15Q8TE58 950 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 AENQ8WTP8 325 aaKnown RBP12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 FAM120BQ96EK7 910 aaKnown RBP12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 ACTRT3Q9BYD9 372 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 BHLHE41Q9C0J9 482 aaPredicted RBP12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 LIME1Q9H400 295 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 NEUROD4Q9HD90 331 aa12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 SSU72Q9NP77 194 aaKnown RBP12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 MCTS1Q9ULC4 181 aaKnown RBP12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 FAF1Q9UNN5 650 aaPredicted RBP12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.24□□□□□ -0.45
TRBV4-1-201ENST00000390357 GJE1A6NN92 205 aa12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 C16orf97H3BN30 126 aa12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 ADAMDEC1O15204 470 aa12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 SEC14L5O43304 696 aa12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 SPAG7O75391 227 aa12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 CGAP01215 116 aa12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 PABPC4LP0CB38 370 aaKnown RBP12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 POU2F1P14859 743 aa12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 PPP3CBP16298 524 aa12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 TCEA1P23193 301 aaKnown RBP12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 ME2P23368 584 aa12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 SUMO3P55854 103 aaPredicted RBP12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 CLDN20P56880 219 aa12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 C21orf58P58505 322 aa12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 EMX2Q04743 252 aa12.23□□□□□ -0.45
TRBV4-1-201ENST00000390357 FAM27E3Q08E93 113 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms