RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 HLA-FP30511 346 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 ETV6P41212 452 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 KCNJ5P48544 419 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 ART1P52961 327 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 DSC1Q08554 894 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 OPCMLQ14982 345 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 GRK1Q15835 563 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 HBMQ6B0K9 141 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 CFAP77Q6ZQR2 320 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 KIAA1958Q8N8K9 716 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 PXYLP1Q8TE99 480 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 THAP4Q8WY91 577 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 SMPDL3BQ92485 455 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 ZC3H10Q96K80 434 aaKnown RBP12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 HS6ST2Q96MM7 605 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 GAL3ST4Q96RP7 486 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 CDCP1Q9H5V8 836 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 COPS3Q9UNS2 423 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 TEX51A0A1B0GUA7 166 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 TRDV1A0A1B0GX56 115 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 FABP5Q01469 135 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 TSPAN31Q12999 210 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 SSX1Q16384 188 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 ENTPD8Q5MY95 495 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 BAIAP2L2Q6UXY1 529 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 OR56A3Q8NH54 315 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 TRIM2Q9C040 744 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 LAMP5Q9UJQ1 280 aa12.35□□□□□ -0.43
TRAPPC9-201ENST00000389328 KIAA1217Q5T5P2 1943 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 DOCK5Q9H7D0 1870 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 MN1Q10571 1320 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 TRAPPC13A5PLN9 417 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 MEIS3P1A6NDR6 274 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 PIP5K1CO60331 668 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 RENP00797 406 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 SLC6A12P48065 614 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 MRPL19P49406 292 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 GDI2P50395 445 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 TCTN3Q6NUS6 607 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 SFXN4Q6P4A7 337 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 RSPO2Q6UXX9 243 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 GATSQ8NAP1 163 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 OR10H5Q8NGA6 315 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 CNN2Q99439 309 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 NOX3Q9HBY0 568 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 SLAMF7Q9NQ25 335 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 NHSL1Q5SYE7 1610 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 ATP6V1G2-DDX39BF2Z307 99 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 SOX18P35713 384 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 CLDN12P56749 244 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 ERVK-25P63136 954 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 CCNJQ5T5M9 372 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 KANSL1Q7Z3B3 1105 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 TMEM173Q86WV6 379 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 SGTBQ96EQ0 304 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 TMEM43Q9BTV4 400 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 MFFQ9GZY8 342 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 MVB12BQ9H7P6 319 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 OR2S2Q9NQN1 319 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 CENPMQ9NSP4 180 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 SPATA6Q9NWH7 488 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 BACE2Q9Y5Z0 518 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 A0A1W2PQ45 241 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 A0A1W2PQY0 241 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 PRKRAO75569 313 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 INHAP05111 366 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 MAPK3P27361 379 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 CERS1P27544 350 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 PCGF3Q3KNV8 242 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 TCTE1Q5JU00 501 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 APOOLQ6UXV4 268 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 QSOX2Q6ZRP7 698 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 OR56B4Q8NH76 319 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 C5orf34Q96MH7 638 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 TMEM106CQ9BVX2 250 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 KATNBL1Q9H079 304 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 ATG5Q9H1Y0 275 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 PCDHB16Q9NRJ7 776 aa12.34□□□□□ -0.43
TRAPPC9-201ENST00000389328 GXYLT2A0PJZ3 443 aa12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 H3BQ06 376 aaPredicted RBP12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 CASC3O15234 703 aaKnown RBP12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 CA12O43570 354 aa12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 RLN2P04090 185 aa12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 RBMS1P29558 406 aaKnown RBP12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 TRIM23P36406 574 aa12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 BMPR1AP36894 532 aa12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 FXYD6P3P58550 94 aa12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 OCLNQ16625 522 aa12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 ALG1LQ6GMV1 187 aa12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 SLC25A24Q6NUK1 477 aa12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 PRSS45Q7RTY3 260 aa12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 ZER1Q7Z7L7 766 aa12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 ZNF527Q8NB42 609 aa12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 ZNF680Q8NEM1 530 aa12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 MTHFD2LQ9H903 347 aaPredicted RBP12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 C1GALT1Q9NS00 363 aa12.33□□□□□ -0.43
TRAPPC9-201ENST00000389328 TRAV27A0A087WT01 109 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 FOXE1O00358 373 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 NPPBP16860 134 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 KIAA1024LP59773 190 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms