RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 DHCR7Q9UBM7 475 aaKnown RBP-0.58□□□□□ -2.5
MIR548A3-201ENST00000385297 LHX3Q9UBR4 397 aa-0.58□□□□□ -2.5
MIR548A3-201ENST00000385297 OR12D3Q9UGF7 316 aa-0.58□□□□□ -2.5
MIR548A3-201ENST00000385297 ZNF222Q9UK12 451 aa-0.58□□□□□ -2.5
MIR548A3-201ENST00000385297 FBXL5Q9UKA1 691 aa-0.58□□□□□ -2.5
MIR548A3-201ENST00000385297 SLC9A8Q9Y2E8 581 aa-0.58□□□□□ -2.5
MIR548A3-201ENST00000385297 DYNC1LI1Q9Y6G9 523 aaKnown RBP-0.58□□□□□ -2.5
MIR548A3-201ENST00000385297 MED13Q9UHV7 2174 aa-0.58□□□□□ -2.5
MIR548A3-201ENST00000385297 SCN1AP35498 2009 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 hCG_1809904A0A1W2PP81 198 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 A0A1W2PPE2 198 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 A0A1W2PR64 198 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 H0YL77 283 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 SLC28A1O00337 649 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 RBFOX2O43251 390 aaKnown RBP eCLIP-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 TADA2AO75478 443 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 PGLSO95336 258 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 GSTA2P09210 222 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 CSH1P0DML2 217 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 CSH2P0DML3 217 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 CXCL5P42830 114 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 RAB28P51157 221 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 RPS11P62280 158 aaKnown RBP eCLIP-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 CSNK1G2P78368 415 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 MPP1Q00013 466 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 PLOD1Q02809 727 aaPredicted RBP-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 ZNF616Q08AN1 781 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 KLF17Q5JT82 389 aaPredicted RBP-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 PHLDB2Q86SQ0 1253 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 ANKRD46Q86W74 232 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 NAXEQ8NCW5 288 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 SPATA18Q8TC71 538 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 ZFP90Q8TF47 636 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 IL1F10Q8WWZ1 152 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 TMEM80Q96HE8 168 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 RMDN2Q96LZ7 410 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 PPM1MQ96MI6 270 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 LRRC2Q9BYS8 371 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 CHIAQ9BZP6 476 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 OR11A1Q9GZK7 315 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 PDE7BQ9NP56 450 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 SLC25A37Q9NYZ2 338 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 ANKMY1Q9P2S6 941 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 TRAPPC4Q9Y296 219 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 SIGLEC9Q9Y336 463 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 LIPGQ9Y5X9 500 aa-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 RPAP1Q9BWH6 1393 aaPredicted RBP-0.59□□□□□ -2.5
MIR548A3-201ENST00000385297 PTPRTO14522 1441 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 PDS5BQ9NTI5 1447 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 TRBC2A0A5B9 178 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 ILVBLA1L0T0 632 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 SPECC1L-ADORA2AF8WAN1 911 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 LGALS9O00182 355 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 TLR4O00206 839 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 EI24O14681 340 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 TNFSF13O75888 250 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 IL4P05112 153 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 ZNF250P15622 560 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 LBPP18428 481 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 GCKP35557 465 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 NPBWR1P48145 328 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 GEMIN4P57678 1058 aaKnown RBP-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 MZT1Q08AG7 82 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 KLF5Q13887 457 aaPredicted RBP-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 TCHHL1Q5QJ38 904 aaPredicted RBP-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 TXNRD3NBQ6F5E7 133 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 SPINT4Q6UDR6 99 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 PARGQ86W56 976 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 CPXCR1Q8N123 301 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 NKAPP1Q8N9T2 125 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 OR2L3Q8NG85 312 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 OR8H1Q8NGG4 311 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 OR5W2Q8NH69 310 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 SECISBP2LQ93073 1101 aaKnown RBP-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 LHX4Q969G2 390 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 TIMD4Q96H15 378 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 RNF5Q99942 180 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 SHANK2-AS3Q9BTD1 123 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 RNF126Q9BV68 326 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 FAM129AQ9BZQ8 928 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 LMAN1LQ9HAT1 526 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 TMEM106BQ9NUM4 274 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 AIG1Q9NVV5 245 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 CPSF2Q9P2I0 782 aaKnown RBP-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 SWAP70Q9UH65 585 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 FN1P02751 2386 aaKnown RBP-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 DOCK8Q8NF50 2099 aa-0.6□□□□□ -2.51
MIR548A3-201ENST00000385297 ICE1Q9Y2F5 2266 aa-0.61□□□□□ -2.51
MIR548A3-201ENST00000385297 RAMP1O60894 148 aa-0.61□□□□□ -2.51
MIR548A3-201ENST00000385297 CCNKO75909 580 aa-0.61□□□□□ -2.51
MIR548A3-201ENST00000385297 TSPAN9O75954 239 aa-0.61□□□□□ -2.51
MIR548A3-201ENST00000385297 AGR2O95994 175 aa-0.61□□□□□ -2.51
MIR548A3-201ENST00000385297 EPOP01588 193 aa-0.61□□□□□ -2.51
MIR548A3-201ENST00000385297 CHTF8P0CG12 524 aa-0.61□□□□□ -2.51
MIR548A3-201ENST00000385297 MAT2AP31153 395 aaKnown RBP-0.61□□□□□ -2.51
MIR548A3-201ENST00000385297 EIF2DP41214 584 aaKnown RBP-0.61□□□□□ -2.51
MIR548A3-201ENST00000385297 RPS4XP62701 263 aaKnown RBP-0.61□□□□□ -2.51
MIR548A3-201ENST00000385297 SPIBQ01892 262 aa-0.61□□□□□ -2.51
MIR548A3-201ENST00000385297 CDC20Q12834 499 aa-0.61□□□□□ -2.51
MIR548A3-201ENST00000385297 CRY2Q49AN0 593 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms