RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 PPP1R42Q7Z4L9 355 aa3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 MYPOPQ86VE0 399 aaPredicted RBP3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 SLC38A6Q8IZM9 456 aa3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 Q8N9G6 341 aaPredicted RBP3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 DENND6BQ8NEG7 585 aa3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 OR9A4Q8NGU2 314 aa3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 AGAP11Q8TF27 550 aa3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 TXN2Q99757 166 aa3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 APOL2Q9BQE5 337 aa3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 ALG12Q9BV10 488 aa3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 UBXN6Q9BZV1 441 aa3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 PNNQ9H307 717 aaKnown RBP3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 GORASP2Q9H8Y8 452 aa3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 EXOSC3Q9NQT5 275 aaKnown RBP3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 CUTCQ9NTM9 273 aa3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 SNX6Q9UNH7 406 aa3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 L3MBTL1Q9Y468 752 aa3.48□□□□□ -1.85
RNU6-549P-201ENST00000384433 A8MUI8 341 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 K7EQM0 130 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 TBX19O60806 448 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 BCAS1O75363 584 aaPredicted RBP3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 CA1P00915 261 aaPredicted RBP3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 UGT2B4P06133 528 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 HNF1AP20823 631 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 EMDP50402 254 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 DSCR10P59022 87 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 TIMM50Q3ZCQ8 353 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 CCDC152Q4G0S7 254 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 SCYL2Q6P3W7 929 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 HPS6Q86YV9 775 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 CSNK1A1LQ8N752 337 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 ZSCAN4Q8NAM6 433 aaPredicted RBP3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 RAET1EQ8TD07 263 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 VN1R17PQ8TDU5 208 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 SPRYD4Q8WW59 207 aaPredicted RBP3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 FAM3CQ92520 227 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 ZNF607Q96SK3 696 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 CRACR2AQ9BSW2 395 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 OPN3Q9H1Y3 402 aaPredicted RBP3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 MIEF1Q9NQG6 463 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 SMPD3Q9NY59 655 aaPredicted RBP3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 MRPL39Q9NYK5 338 aaKnown RBP3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 GNG12Q9UBI6 72 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 CYTH4Q9UIA0 394 aa3.47□□□□□ -1.85
RNU6-549P-201ENST00000384433 POGZQ7Z3K3 1410 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 FAM220BPB1ANY3 271 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 SCRG1O75711 98 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 HBQ1P09105 142 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 GIG44P09565 113 aaPredicted RBP3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 H2AFXP16104 143 aaPredicted RBP3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 PCMT1P22061 227 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 FASP25445 335 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 CHI3L1P36222 383 aaPredicted RBP3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 MAGEA9P43362 315 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 LMO4P61968 165 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 TGIF1Q15583 401 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 SYPL1Q16563 259 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 PVRIGQ6DKI7 326 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 CGB2Q6NT52 195 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 KCNIP4Q6PIL6 250 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 TMEM17Q86X19 198 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 ERICH1Q86X53 443 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 C9orf40Q8IXQ3 194 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 GPR65Q8IYL9 337 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 MCOLN2Q8IZK6 566 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 OR52M1Q8NGK5 317 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 OR5L2Q8NGL0 311 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 SPATA3Q8NHX4 192 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 CTNNBL1Q8WYA6 563 aaPredicted RBP3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 NOL4LQ96MY1 436 aaPredicted RBP3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 FOXN4Q96NZ1 517 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 PSMB7Q99436 277 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 SLC6A7Q99884 636 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 EDEM2Q9BV94 578 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 TSSK1BQ9BXA7 367 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 PAK1IP1Q9NWT1 392 aaPredicted RBP3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 GALPQ9UBC7 116 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 RSPH14Q9UHP6 348 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 MRPS33Q9Y291 106 aaKnown RBP3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 OR10H1Q9Y4A9 318 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 COL5A2P05997 1499 aaPredicted RBP3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 GON4LQ3T8J9 2241 aa3.46□□□□□ -1.86
RNU6-549P-201ENST00000384433 IGHV3-35A0A0C4DH35 117 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 GSAPA4D1B5 854 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 H3BMQ9 156 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 PRRG1O14668 218 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 GMFGO60234 142 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 SPAG6O75602 509 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 KIAA0754O94854 1291 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 PGAM2P15259 253 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 IGHV1-2P23083 117 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 ATP5A1P25705 553 aaKnown RBP3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 HPCAL1P37235 193 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 GNPDA1P46926 289 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 VLDLRP98155 873 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 CUL1Q13616 776 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 KCNJ11Q14654 390 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 LAGE3Q14657 143 aa3.45□□□□□ -1.86
RNU6-549P-201ENST00000384433 SLC5A12Q1EHB4 618 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms