RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 FAM83FQ8NEG4 500 aaPredicted RBP8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 GEMIN6Q8WXD5 167 aaKnown RBP8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 LCORQ96JN0 433 aaPredicted RBP8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 MRGPRX2Q96LB1 330 aa8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 AJAP1Q9UKB5 411 aaPredicted RBP8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 C9orf172C9J069 976 aa8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 PDLIM1O00151 329 aa8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 SHOX2O60902 331 aaPredicted RBP8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 OXSR1O95747 527 aaPredicted RBP8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 GSTT1P30711 240 aa8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 MMP12P39900 470 aa8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 CRTC2Q53ET0 693 aaPredicted RBP8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 LINC01599Q8WXQ3 324 aa8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 ZNF75CPQ92670 426 aaPredicted RBP8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 LPAR2Q9HBW0 351 aa8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 FAM120CQ9NX05 1096 aaKnown RBP8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 KLHL42Q9P2K6 505 aa8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 PDE10AQ9Y233 779 aa8.62□□□□□ -1.03
LIMCH1-202ENST00000381753 SLC30A4O14863 429 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 DEFA4P12838 97 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 UNGP13051 313 aaPredicted RBP8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 CHRNB2P17787 502 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 TGM4P49221 684 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 CTXN1P60606 82 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 RIPK1Q13546 671 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 PYCR3Q53H96 274 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 TMEM65Q6PI78 240 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 TMEM64Q6YI46 380 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 SLITRK4Q8IW52 837 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 SLC35F3Q8IY50 421 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 OR5M1Q8NGP8 315 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 PIGCQ92535 297 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 AP3S1Q92572 193 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 TMEM43Q9BTV4 400 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 PITHD1Q9GZP4 211 aaPredicted RBP8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 ZNF701Q9NV72 531 aaPredicted RBP8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 B3GAT1Q9P2W7 334 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 HAO1Q9UJM8 370 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 CLEC4EQ9ULY5 219 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 CMAHPQ9Y471 501 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 TOGARAM1Q9Y4F4 1720 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 A0A0U1RQS6 177 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 A0A1W2PRQ8 180 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 UGT2B11O75310 529 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 GABBR2O75899 941 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 ATG12O94817 140 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 HSD3B1P14060 373 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 TTKP33981 857 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 CAPGP40121 348 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 ZNF83P51522 516 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 CLDN15P56746 228 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 GNG2P59768 71 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 DGCR6Q14129 220 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 GAS6Q14393 721 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 ALKBH6Q3KRA9 238 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 SLC35F1Q5T1Q4 408 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 ZFP1Q6P2D0 407 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 MOB3CQ70IA8 216 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 S100A7AQ86SG5 101 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 DND1Q8IYX4 353 aaKnown RBP8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 POGLUT1Q8NBL1 392 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 OR13C3Q8NGS6 347 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 KIR3DX1Q9H7L2 352 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 OR5V1Q9UGF6 321 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 NUFIP1Q9UHK0 495 aaKnown RBP8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 TCF4P15884 667 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 SLC19A1P41440 591 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 CTC1Q2NKJ3 1217 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 FAM205BPQ63HN1 556 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 METTL2BQ6P1Q9 378 aaKnown RBP8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 KLHL36Q8N4N3 616 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 DTX3Q8N9I9 347 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 STEAP2Q8NFT2 490 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 SLC46A1Q96NT5 459 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 HOPXQ9BPY8 73 aaPredicted RBP8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 SLC25A18Q9H1K4 315 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 TBCCD1Q9NVR7 557 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 HIF1ANQ9NWT6 349 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 ZDHHC9Q9Y397 364 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 NRP2O60462 931 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 ADAM23O75077 832 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 GRPP07492 148 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 SOX18P35713 384 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 LSSP48449 732 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 ZNF81P51508 661 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 SH3BP2P78314 561 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 GAB1Q13480 694 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 UGT3A2Q3SY77 523 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 PYHIN1Q6K0P9 492 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 UNQ9370/PRO34162Q6UXP9 181 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 OR51A7Q8NH64 312 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 ZNF707Q96C28 371 aaPredicted RBP8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 EBF1Q9UH73 591 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 ZNF879B4DU55 563 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 ZMPSTE24O75844 475 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 PDE5AO76074 875 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 HMGA1P17096 107 aaKnown RBP8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 IMPDH1P20839 514 aa8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 CSRP1P21291 193 aaKnown RBP8.61□□□□□ -1.03
LIMCH1-202ENST00000381753 CRABP1P29762 137 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms