RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 C22orf34Q6ZV56 151 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 CAMKMTQ7Z624 323 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 ZNF610Q8N9Z0 462 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 OR7A2PQ8NGA2 310 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 ZFP28Q8NHY6 868 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 ZBED6CLQ96FA7 236 aaPredicted RBP12.72□□□□□ -0.37
SHOX-202ENST00000381575 PIK3IP1Q96FE7 263 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 CHMP6Q96FZ7 201 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 POM121Q96HA1 1249 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 APOPT1Q96IL0 206 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 MS4A4EQ96PG1 132 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 SMR3AQ99954 134 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 MED18Q9BUE0 208 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 C1orf50Q9BV19 199 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 IQCGQ9H095 443 aaKnown RBP12.72□□□□□ -0.37
SHOX-202ENST00000381575 RNF122Q9H9V4 155 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 DLL4Q9NR61 685 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 JMJD1CQ15652 2540 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 CADP27708 2225 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 IGLV3-32A0A0A0MS00 114 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 NPIPA5A0A0B4J1W7 369 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 DEFB108AA8MXU0 73 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 NPIPA7E9PJI5 369 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 CTIFO43310 598 aaKnown RBP12.71□□□□□ -0.37
SHOX-202ENST00000381575 NDUFB5O43674 189 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 CHEK2O96017 543 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 CGAP01215 116 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 CRHP06850 196 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 NPIPA8P0DM63 369 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 ARRB2P32121 409 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 UGT2B10P36537 528 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 FRKP42685 505 aaPredicted RBP12.71□□□□□ -0.37
SHOX-202ENST00000381575 C17orf67Q0P5P2 114 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 SGCBQ16585 318 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 TMEM44Q2T9K0 475 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 UGT3A2Q3SY77 523 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 ARL13AQ5H913 290 aaPredicted RBP12.71□□□□□ -0.37
SHOX-202ENST00000381575 Q71RC1 249 aaPredicted RBP12.71□□□□□ -0.37
SHOX-202ENST00000381575 KRTAP1-3Q8IUG1 177 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 METTL25Q8N6Q8 603 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 COX18Q8N8Q8 333 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 BANPQ8N9N5 519 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 CDRT4Q8N9R6 151 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 HOXB13Q92826 284 aaPredicted RBP12.71□□□□□ -0.37
SHOX-202ENST00000381575 METTL2AQ96IZ6 378 aaKnown RBP12.71□□□□□ -0.37
SHOX-202ENST00000381575 SIRT3Q9NTG7 399 aaPredicted RBP12.71□□□□□ -0.37
SHOX-202ENST00000381575 GIN1Q9NXP7 522 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 MID2Q9UJV3 735 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 ZNF175Q9Y473 711 aa12.71□□□□□ -0.37
SHOX-202ENST00000381575 FN1P02751 2386 aaKnown RBP12.71□□□□□ -0.37
SHOX-202ENST00000381575 A0A1W2PRB8 838 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 ALG1L2C9J202 215 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 SCAMP2O15127 329 aaKnown RBP12.7□□□□□ -0.38
SHOX-202ENST00000381575 EMC8O43402 210 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 TBX19O60806 448 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 PEX11AO75192 247 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 SKAP2O75563 359 aaPredicted RBP12.7□□□□□ -0.38
SHOX-202ENST00000381575 EEFSECP57772 596 aaKnown RBP12.7□□□□□ -0.38
SHOX-202ENST00000381575 RPS3AP61247 264 aaKnown RBP12.7□□□□□ -0.38
SHOX-202ENST00000381575 LASP1Q14847 261 aaKnown RBP12.7□□□□□ -0.38
SHOX-202ENST00000381575 CD226Q15762 336 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 VPS26BQ4G0F5 336 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 TRABD2AQ86V40 505 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 EIF1ADQ8N9N8 165 aaKnown RBP12.7□□□□□ -0.38
SHOX-202ENST00000381575 OR10D3Q8NH80 312 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 CEP70Q8NHQ1 597 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 CDS1Q92903 461 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 FAM120BQ96EK7 910 aaKnown RBP12.7□□□□□ -0.38
SHOX-202ENST00000381575 ZNF764Q96H86 408 aaPredicted RBP12.7□□□□□ -0.38
SHOX-202ENST00000381575 C3orf30Q96M34 536 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 RNF145Q96MT1 663 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 HS3ST6Q96QI5 342 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 TRMOQ9BU70 441 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 PRRG4Q9BZD6 226 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 KLHL4Q9C0H6 718 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 ANKZF1Q9H8Y5 726 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 PPCSQ9HAB8 311 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 UBTD1Q9HAC8 227 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 NEUROD4Q9HD90 331 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 MED17Q9NVC6 651 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 NTMQ9P121 344 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 PROCRQ9UNN8 238 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 TRAF6Q9Y4K3 522 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 SNX8Q9Y5X2 465 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 AP4B1Q9Y6B7 739 aa12.7□□□□□ -0.38
SHOX-202ENST00000381575 UQCRHLA0A096LP55 91 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 TTC36A6NLP5 189 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 TNFSF11O14788 317 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 OIP5O43482 229 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 CXCL13O43927 109 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 GOSR1O95249 250 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 SLU7O95391 586 aaKnown RBP12.69□□□□□ -0.38
SHOX-202ENST00000381575 HMGN2P05204 90 aaKnown RBP12.69□□□□□ -0.38
SHOX-202ENST00000381575 IFI6P09912 130 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 ALOX5P09917 674 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 LAMP1P11279 417 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 CREB1P16220 341 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 IL11P20809 199 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 TBXA2RP21731 343 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 SHC1P29353 583 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms