RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 C9orf40Q8IXQ3 194 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 SLC5A8Q8N695 610 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 DEFB124Q8NES8 71 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 B3GNT7Q8NFL0 401 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 GATA6Q92908 595 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 PRRC1Q96M27 445 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 GAL3ST4Q96RP7 486 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 MBOAT4Q96T53 435 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 FEVQ99581 238 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 DDA1Q9BW61 102 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 ANKRD60Q9BZ19 345 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 WWTR1Q9GZV5 400 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 HOXD1Q9GZZ0 328 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 PADI1Q9ULC6 663 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 WASF3Q9UPY6 502 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 KNTC1P50748 2209 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 TRBV4-1A0A0J9YWV2 114 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 PMS2P1A4D2B8 440 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 CDHR4A6H8M9 788 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 MAGEA13PA6NCF6 341 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 NPIPB9F8W1W9 429 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 PLD2O14939 933 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 TO15178 435 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 CYP7B1O75881 506 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 CD63P08962 238 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 CDH2P19022 906 aaPredicted RBP13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 MYF6P23409 242 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 RNF144AP50876 292 aaPredicted RBP13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 NR0B1P51843 470 aaKnown RBP13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 HOXC5Q00444 222 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 EIF3IQ13347 325 aaKnown RBP13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 EBPQ15125 230 aaKnown RBP13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 FGD3Q5JSP0 725 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 HES3Q5TGS1 186 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 PAPD4Q6PIY7 484 aaKnown RBP13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 FAM198BQ6UWH4 519 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 ZNF517Q6ZMY9 492 aaPredicted RBP13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 GALNT5Q7Z7M9 940 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 ZNF614Q8N883 585 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 HSPBAP1Q96EW2 488 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 LPAR4Q99677 370 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 WDR77Q9BQA1 342 aaPredicted RBP13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 PSD2Q9BQI7 771 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 MESP1Q9BRJ9 268 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 SEMA4CQ9C0C4 833 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 NRSN2Q9GZP1 204 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 CTPS2Q9NRF8 586 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 KRT84Q9NSB2 600 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 PPIEQ9UNP9 301 aaKnown RBP13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 PTRH2Q9Y3E5 179 aaKnown RBP13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 CHD8Q9HCK8 2581 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 COL27A1Q8IZC6 1860 aaPredicted RBP13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 ASPMQ8IZT6 3477 aa13.4□□□□□ -0.26
SYNGR1-204ENST00000381535 FRYQ5TBA9 3013 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 A0A1W2PRQ8 180 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 CPSF4LA6NMK7 179 aaKnown RBP13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 FAAHO00519 579 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 REM1O75628 298 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 OXSR1O95747 527 aaPredicted RBP13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 GASTP01350 101 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 GKN3PP0CG01 181 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 ELAVL4P26378 380 aaKnown RBP13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 CHN2P52757 468 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 RNF4P78317 190 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 ST3GAL3Q11203 375 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 KCNAB2Q13303 367 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 DGCR6Q14129 220 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 TRAM2Q15035 370 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 NCF4Q15080 339 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 ENTPD8Q5MY95 495 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 TMEM164Q5U3C3 297 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 KRT80Q6KB66 452 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 PODNL1Q6PEZ8 512 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 HSDL2Q6YN16 418 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 PLEKHM3Q6ZWE6 761 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 USP51Q70EK9 711 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 RANBP3LQ86VV4 465 aaPredicted RBP13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 TSPYL5Q86VY4 417 aaPredicted RBP13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 AMER2Q8N7J2 671 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 ZNF441Q8N8Z8 693 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 OR4C3Q8NH37 302 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 WDR36Q8NI36 951 aaKnown RBP13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 CNOT9Q92600 299 aaKnown RBP13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 TP53INP1Q96A56 240 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 EFHD2Q96C19 240 aaPredicted RBP13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 C8orf44Q96CB5 159 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 VMP1Q96GC9 406 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 LMF1Q96S06 567 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 FUZQ9BT04 418 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 RIBC2Q9H4K1 309 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 ZNF556Q9HAH1 456 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 NTNG1Q9Y2I2 539 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 PCDHGB5Q9Y5G0 923 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 PCDHGA3Q9Y5H0 932 aa13.39□□□□□ -0.27
SYNGR1-204ENST00000381535 SPEGQ15772 3267 aa13.38□□□□□ -0.27
SYNGR1-204ENST00000381535 LOC100130705A0A1B0GUX0 176 aa13.38□□□□□ -0.27
SYNGR1-204ENST00000381535 A0A1W2PNU3 283 aaPredicted RBP13.38□□□□□ -0.27
SYNGR1-204ENST00000381535 SH3PXD2BA1X283 911 aa13.38□□□□□ -0.27
SYNGR1-204ENST00000381535 CDC14CA4D256 554 aa13.38□□□□□ -0.27
SYNGR1-204ENST00000381535 ARRDC5A6NEK1 342 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms