RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ACKR2O00590 384 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 GUSBP08236 651 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 EBLN1P0CF75 366 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 BPIP17213 487 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 ACHEP22303 614 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 BDKRB2P30411 391 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 THBS2P35442 1172 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 AKR1C3P42330 323 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 NRG1Q02297 640 aaPredicted RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 TMIGD1Q6UXZ0 262 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 TOMM5Q8N4H5 51 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 SLC24A4Q8NFF2 622 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 TRAPPC12Q8WVT3 735 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 SENP5Q96HI0 755 aaPredicted RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 ZNF845Q96IR2 970 aaPredicted RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 NT5C1AQ9BXI3 368 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 GABARAPL3Q9BY60 117 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 TMEM231Q9H6L2 316 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 ALG9Q9H6U8 611 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 PARD6AQ9NPB6 346 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 PDLIM7Q9NR12 457 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 A0A087X1B8 175 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 EFSO43281 561 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 HIST1H2ABP04908 130 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 HOXB5P09067 269 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 SLC35G4P0C7Q5 338 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 HOXA5P20719 270 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 CDX1P47902 265 aaPredicted RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 SKP1P63208 163 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 PITX1P78337 314 aaPredicted RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 SLC9A5Q14940 896 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 ODF4Q2M2E3 257 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 UNC50Q53HI1 259 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 ZNF678Q5SXM1 525 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 HIST3H2AQ7L7L0 130 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 LDB1Q86U70 411 aaPredicted RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 OR13C3Q8NGS6 347 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 NUDT8Q8WV74 236 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 HIST1H2ACQ93077 130 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 EMID1Q96A84 441 aaPredicted RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 CNTNAP3BQ96NU0 1288 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 TMEM248Q9NWD8 314 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 GSTK1Q9Y2Q3 226 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 TMEM184BQ9Y519 407 aaPredicted RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 MIA3Q5JRA6 1907 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 OR6C76A6NM76 312 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 MCIDASD6RGH6 385 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 J3KR12 359 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 M0QYT0 321 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 MDM4O15151 490 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 PIGRP01833 764 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 THP07101 528 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 C1GALT1C1LP0DN25 315 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 TFPIP10646 304 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 ELK1P19419 428 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 ADH6P28332 368 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 PPP2R1BP30154 601 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 STXBP1P61764 594 aaKnown RBP8.78□□□□□ -1
PTPRA-204ENST00000380393 RAP1AP62834 184 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 GAGE1Q13065 139 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 ZNF630Q2M218 657 aaPredicted RBP8.78□□□□□ -1
PTPRA-204ENST00000380393 SOWAHAQ2M3V2 549 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 ATPAF1Q5TC12 328 aaPredicted RBP8.78□□□□□ -1
PTPRA-204ENST00000380393 CDC73Q6P1J9 531 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 FAHD1Q6P587 224 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 THNSL2Q86YJ6 484 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 SLC35F3Q8IY50 421 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 CD99L2Q8TCZ2 262 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 C7orf34Q96L11 122 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 OR4K3Q96R72 315 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 ATF6BQ99941 703 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 GAL3ST2Q9H3Q3 398 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 CNOT2Q9NZN8 540 aaKnown RBP8.78□□□□□ -1
PTPRA-204ENST00000380393 CHRNA9Q9UGM1 479 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 LCTP09848 1927 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 hCG_1809904A0A1W2PP81 198 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 A0A1W2PR64 198 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 A0A1W2PRV1 198 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 ERI2A8K979 691 aaKnown RBP8.78□□□□□ -1
PTPRA-204ENST00000380393 MKRN2OSH3BPM6 223 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 PHOX2AO14813 284 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 BCAT2O15382 392 aaPredicted RBP8.78□□□□□ -1
PTPRA-204ENST00000380393 TXNDC12O95881 172 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 FABP3P05413 133 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 AVPR2P30518 371 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 ADCYAP1R1P41586 468 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 RPIAP49247 311 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 CLDN8P56748 225 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 LMAN2Q12907 356 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 TDGQ13569 410 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 KCNMB1Q16558 191 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 ZNF805Q5CZA5 627 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 NHLRC1Q6VVB1 395 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 LINGO2Q7L985 606 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 MFSD6LQ8IWD5 586 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 OR56A4Q8NGH8 313 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 PROKR1Q8TCW9 393 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 GNPDA2Q8TDQ7 276 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 MTERF1Q99551 399 aaKnown RBP8.78□□□□□ -1
PTPRA-204ENST00000380393 MESP1Q9BRJ9 268 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms