RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SLC5A8Q8N695 610 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 NPWQ8N729 165 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 OR4Q3Q8NH05 313 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 RPLP0P6Q8NHW5 317 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 ACOT11Q8WXI4 607 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 LRIG1Q96JA1 1093 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 ASB16Q96NS5 453 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 ATG101Q9BSB4 218 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 SLC38A1Q9H2H9 487 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 CHRDQ9H2X0 955 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 HEBP1Q9NRV9 189 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 ACSS1Q9NUB1 689 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 MARCH5Q9NX47 278 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 UBP1Q9NZI7 540 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF629Q9UEG4 869 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 NINQ8N4C6 2090 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 NUP205Q92621 2012 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 TRBV5-3A0A0A0MS03 114 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 SHISA3A0PJX4 238 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 NCF1BA6NI72 391 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 SLC38A8A6NNN8 435 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 NCF1CA8MVU1 366 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 C5orf58C9J3I9 102 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 FAM72CH0Y354 149 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 GFYI3L273 518 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 FOXE1O00358 373 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 OR10H2O60403 315 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 HIST1H2ABP04908 130 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 ADPRHP54922 357 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 MAT1AQ00266 395 aaKnown RBP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 USF2Q15853 346 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF239Q16600 458 aaKnown RBP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 ZRANB3Q5FWF4 1079 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 SLC35D3Q5M8T2 416 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 FAM72AQ5TYM5 149 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 ATG9BQ674R7 924 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 OR52W1Q6IF63 320 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 FAM72DQ6L9T8 149 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 FAM111BQ6SJ93 734 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 Q6ZSR9 355 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 HIST3H2AQ7L7L0 130 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 FAM72BQ86X60 149 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 SCN4BQ8IWT1 228 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 GPR135Q8IZ08 494 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 OR56B4Q8NH76 319 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 HIST1H2ACQ93077 130 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 POP5Q969H6 163 aaKnown RBP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 HIST1H2BAQ96A08 127 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 PKP4Q99569 1192 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 EPYCQ99645 322 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 NIPSNAP1Q9BPW8 284 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 SLC39A8Q9C0K1 460 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 TSPAN10Q9H1Z9 355 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 NCOR1P1Q9H4R4 102 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 TMEM30AQ9NV96 361 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 RBM22Q9NW64 420 aaKnown RBP eCLIP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 DNAJB11Q9UBS4 358 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 KCTD3Q9Y597 815 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 TIMM13Q9Y5L4 95 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 A0A1B0GVC2 190 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 A6NIN4 97 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 HMSDA8MTL9 139 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 AP4M1O00189 453 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 IFRD1O00458 451 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 MID1O15344 667 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 WISP3O95389 354 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF35P13682 527 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 CPEP16870 476 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 MPGP29372 298 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SLC11A1P49279 550 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 RAP2BP61225 183 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 PITX1P78337 314 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 SEMG2Q02383 582 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 NHLH2Q02577 135 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 PLA2G7Q13093 441 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 NAE1Q13564 534 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 CRTC2Q53ET0 693 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 ARTNQ5T4W7 220 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SPNS3Q6ZMD2 512 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 QSOX2Q6ZRP7 698 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF551Q7Z340 670 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 TCEAL8Q8IYN2 117 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 PRSS35Q8N3Z0 413 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 GNPDA2Q8TDQ7 276 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 EDEM1Q92611 657 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 C1GALT1C1Q96EU7 318 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 BSCL2Q96G97 398 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 HSH2DQ96JZ2 352 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 AMDHD1Q96NU7 426 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 TGM7Q96PF1 710 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 PBX4Q9BYU1 374 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 PRO1933Q9H354 126 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 MTG2Q9H4K7 406 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SLC25A19Q9HC21 320 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SIRT7Q9NRC8 400 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 TEX10Q9NXF1 929 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 KLHL9Q9P2J3 617 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SF3B6Q9Y3B4 125 aaKnown RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 SNX11Q9Y5W9 270 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 VWA8A3KMH1 1905 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms