RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 SLC19A3Q9BZV2 496 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 REEP1Q9H902 201 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 PARPBPQ9NWS1 579 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 SCN3BQ9NY72 215 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 SLAMF8Q9P0V8 285 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 DOCK1Q14185 1865 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 ABCA1O95477 2261 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 PKDREJQ9NTG1 2253 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 ANKRD61A6NGH8 418 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 ANXA2P2A6NMY6 339 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 RGS9O75916 674 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-202ENST00000379446 IFNA2P01563 188 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 CAPGP40121 348 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 NUDT6P53370 316 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 PRDX1Q06830 199 aaKnown RBP6.12□□□□□ -1.43
NEDD9-202ENST00000379446 ZNF169Q14929 603 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-202ENST00000379446 PAGE3Q5JUK9 113 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 SPANXN2Q5MJ10 180 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 ATP1A1-AS1Q5TC04 95 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 C1QL3Q5VWW1 255 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 NDUFAF7Q7L592 441 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 TECPR1Q7Z6L1 1165 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 MMP21Q8N119 569 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 CHDHQ8NE62 594 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-202ENST00000379446 RAB2BQ8WUD1 216 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 TRUB1Q8WWH5 349 aaKnown RBP6.12□□□□□ -1.43
NEDD9-202ENST00000379446 ADAMTS14Q8WXS8 1223 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 RAB8BQ92930 207 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 SLC38A4Q969I6 547 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 UBE2FQ969M7 185 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 PGAP3Q96FM1 320 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-202ENST00000379446 ZNF486Q96H40 463 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-202ENST00000379446 C5AR2Q9P296 337 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 B3GNT3Q9Y2A9 372 aa6.12□□□□□ -1.43
NEDD9-202ENST00000379446 AQP12BA6NM10 295 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 HHLA1C9JL84 531 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 DSCR3O14972 297 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 CRYZL1O95825 349 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 WNT11O96014 354 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 MPC1LP0DKB6 136 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 MAOAP21397 527 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 IDH2P48735 452 aaKnown RBP6.11□□□□□ -1.43
NEDD9-202ENST00000379446 CARD18P57730 90 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 RAB25P57735 213 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 NCS1P62166 190 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 NKX3-2P78367 333 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 SPCS2Q15005 226 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 GARNL3Q5VVW2 1013 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 PWWP2BQ6NUJ5 590 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 FAM180BQ6P0A1 224 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 USP43Q70EL4 1123 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 FUNDC1Q8IVP5 155 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 AQP12AQ8IXF9 295 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 IQCF2Q8IXL9 164 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 ZNF540Q8NDQ6 660 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 NUP43Q8NFH3 380 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 OR52E4Q8NGH9 312 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 TEX47Q8TBZ9 253 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 PCNPQ8WW12 178 aaKnown RBP6.11□□□□□ -1.43
NEDD9-202ENST00000379446 LRRC3BQ96PB8 259 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 SLC30A2Q9BRI3 323 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 FUNDC2Q9BWH2 189 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 P2RY12Q9H244 342 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 SMURF2Q9HAU4 748 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 NANSQ9NR45 359 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 ACTR3BQ9P1U1 418 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 ZFYVE26Q68DK2 2539 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 SPTBN4Q9H254 2564 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 SUV39H1O43463 412 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 MED26O95402 600 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 CSTBP04080 98 aaKnown RBP6.11□□□□□ -1.43
NEDD9-202ENST00000379446 C8BP07358 591 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 FOLR1P15328 257 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 GPX3P22352 226 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 BCL6P41182 706 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 MAP2K4P45985 399 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 HTR6P50406 440 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 GPNMBQ14956 572 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 TYSND1Q2T9J0 566 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 ANKRD13BQ86YJ7 626 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 CBARPQ8N350 705 aaPredicted RBP6.11□□□□□ -1.43
NEDD9-202ENST00000379446 ZNF283Q8N7M2 679 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 ASCC1Q8N9N2 400 aaKnown RBP6.11□□□□□ -1.43
NEDD9-202ENST00000379446 PDPRQ8NCN5 879 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 OR2T12Q8NG77 320 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 OR4K1Q8NGD4 311 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 OR52B6Q8NGF0 335 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 CHPT1Q8WUD6 406 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 GAL3ST3Q96A11 431 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 SLC38A2Q96QD8 506 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 PHOX2BQ99453 314 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 EGLN1Q9GZT9 426 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 NXF5Q9H1B4 397 aaKnown RBP6.11□□□□□ -1.43
NEDD9-202ENST00000379446 OBP2BQ9NPH6 170 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 CCM2LQ9NUG4 571 aaPredicted RBP6.11□□□□□ -1.43
NEDD9-202ENST00000379446 CUEDC1Q9NWM3 386 aaPredicted RBP6.11□□□□□ -1.43
NEDD9-202ENST00000379446 TMEM181Q9P2C4 612 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 OR51B4Q9Y5P0 310 aa6.11□□□□□ -1.43
NEDD9-202ENST00000379446 MRPS18BQ9Y676 258 aaKnown RBP6.11□□□□□ -1.43
NEDD9-202ENST00000379446 JMJD1CQ15652 2540 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms