RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 K7EQS6 105 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 BCAS1O75363 584 aaPredicted RBP13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 DNASE1L1P49184 302 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 TMBIM6P55061 237 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 MAD2L1BPQ15013 274 aaPredicted RBP13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 DUSP7Q16829 419 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 TRIM61Q5EBN2 209 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 PLBD1Q6P4A8 553 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 PPP1R3BQ86XI6 285 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 OR6N1Q8NGY5 312 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 OR4K13Q8NH42 304 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 TCEAL2Q9H3H9 227 aaPredicted RBP13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 WSB2Q9NYS7 404 aaPredicted RBP13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 EXOSC1Q9Y3B2 195 aaKnown RBP13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 LOC105369274A0A096LPK9 316 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 LOC102723532A0A0G2JNH3 316 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 MBTPS2O43462 519 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 LCKP06239 509 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 TMEM225Q6GV28 225 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 DNM1P34Q6PK57 102 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 SHFQ7M4L6 423 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 RABEPKQ7Z6M1 372 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 OR4N4Q8N0Y3 316 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 ACBD7Q8N6N7 88 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 YIPF7Q8N8F6 280 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 OR51L1Q8NGJ5 315 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 ZFP3Q96NJ6 502 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 RBP7Q96R05 134 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 TUBA1CQ9BQE3 449 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 BTBD2Q9BX70 525 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 TMEM38AQ9H6F2 299 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 MCUBQ9NWR8 336 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 GNG8Q9UK08 70 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 CARD8Q9Y2G2 431 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 PAPLNO95428 1278 aa13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 MT-ND5P03915 603 aa13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 ATF4P18848 351 aaPredicted RBP13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 OTX2P32243 289 aa13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 GGT2P36268 569 aa13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 STAT5AP42229 794 aa13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 RPS15P62841 145 aaKnown RBP13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 KEAP1Q14145 624 aa13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 SMN1Q16637 294 aaKnown RBP13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF404Q494X3 552 aa13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 CRIPAKQ8N1N5 446 aa13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 ANKRD53Q8N9V6 530 aa13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 OR52E2Q8NGJ4 325 aa13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 NDNFQ8TB73 568 aa13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 BARD1Q99728 777 aaKnown RBP13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 ERVK13-1Q9NX77 482 aa13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 CSNK1G3Q9Y6M4 447 aa13.27□□□□□ -0.28
SHROOM1-203ENST00000378679 PYCR1P32322 319 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 BSGP35613 385 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 KIAA0040Q15053 153 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 ODF4Q2M2E3 257 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 MRPL2Q5T653 305 aaKnown RBP13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 PRSS48Q7RTY5 328 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 CHDHQ8NE62 594 aaPredicted RBP13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 OR2AJ1Q8NGZ0 328 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 TMEM246Q9BRR3 403 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 CLEC4MQ9H2X3 399 aaPredicted RBP13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 SEC14L4Q9UDX3 406 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 BOLA1Q9Y3E2 137 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 ANXA2P2A6NMY6 339 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 DNAJB5O75953 348 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 ANXA2P07355 339 aaKnown RBP13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 EIF1AXP47813 144 aaKnown RBP13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 LIM2P55344 173 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 OR12D2P58182 307 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 GABARAPL2P60520 117 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 TUBA1BP68363 451 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 CD300CQ08708 224 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 ENTPD8Q5MY95 495 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 TSSK4Q6SA08 328 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 CCBE1Q6UXH8 406 aaPredicted RBP13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 TUBA1AQ71U36 451 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 ATCAYQ86WG3 371 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 CPOQ8IVL8 374 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 OR6N2Q8NGY6 317 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 ATOH1Q92858 354 aaPredicted RBP13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 PAQR5Q9NXK6 330 aaPredicted RBP13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 NDUFAF4Q9P032 175 aa13.27□□□□□ -0.29
SHROOM1-203ENST00000378679 TRBV4-1A0A0J9YWV2 114 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 PRKAR1AP10644 381 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 ARFIP1P53367 373 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 KCNJ8Q15842 424 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 NHSL2Q5HYW2 709 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 NLGN4XQ8N0W4 816 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 TOR1AIP2Q8NFQ8 470 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 SLC22A8Q8TCC7 542 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 TRUB1Q8WWH5 349 aaKnown RBP13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 KIAA1143Q96AT1 154 aaPredicted RBP13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 TM9SF2Q99805 663 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 SIAEQ9HAT2 523 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 PLEKHA1Q9HB21 404 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 NINQ8N4C6 2090 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 A0A1W2PRG6 482 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 SH3D21A4FU49 640 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 METTL12A8MUP2 240 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 ZNF670-ZNF695F2Z2N8 137 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms