RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ITGA5P08648 1049 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 HBQ1P09105 142 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 CD38P28907 300 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 CD6P30203 668 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 MMP12P39900 470 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 MTNR1AP48039 350 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 KCNJ5P48544 419 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 RPS15P62841 145 aaKnown RBP14.15□□□□□ -0.14
NPHP4-201ENST00000378156 ACVR1Q04771 509 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 XKR7Q5GH72 579 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 GDPGP1Q6ZNW5 385 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 VRK3Q8IV63 474 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 VWA5B2Q8N398 1253 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 TMEM151AQ8N4L1 468 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 OR5D16Q8NGK9 328 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 THAP4Q8WY91 577 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 RPL3LQ92901 407 aaKnown RBP14.15□□□□□ -0.14
NPHP4-201ENST00000378156 MYEOVQ96EZ4 313 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 UHRF1Q96T88 793 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-201ENST00000378156 INSM2Q96T92 566 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-201ENST00000378156 ACOT13Q9NPJ3 140 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 PCDHB16Q9NRJ7 776 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 SACM1LQ9NTJ5 587 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 MGAT4CQ9UBM8 478 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 KCNN3Q9UGI6 736 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 MYOGP15173 224 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 ARHGAP11AQ6P4F7 1023 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 TRIM46Q7Z4K8 759 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 MEX3DQ86XN8 651 aaKnown RBP14.15□□□□□ -0.14
NPHP4-201ENST00000378156 MCATQ8IVS2 390 aaKnown RBP14.15□□□□□ -0.14
NPHP4-201ENST00000378156 TOR1AIP2Q8NFQ8 470 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 MROQ9BYG7 248 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.15□□□□□ -0.145e-7■■■■■ 29.4
NPHP4-201ENST00000378156 KRBA1A5PL33 1030 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 SLC9B1P1A6NJY1 282 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 FRS3O43559 492 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 FARS2O95363 451 aaKnown RBP14.14□□□□□ -0.15
NPHP4-201ENST00000378156 CLRN1P58418 232 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 ATXN7L3Q14CW9 347 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-201ENST00000378156 COL28A1Q2UY09 1125 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 FAM219BQ5XKK7 198 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 LHX8Q68G74 356 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 CASTOR1Q8WTX7 329 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 RGCCQ9H4X1 137 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 NARSO43776 548 aaKnown RBP14.14□□□□□ -0.15
NPHP4-201ENST00000378156 IFNA2P01563 188 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 FCER2P06734 321 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 SOX3P41225 446 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 TRA2BP62995 288 aaKnown RBP14.14□□□□□ -0.15
NPHP4-201ENST00000378156 GAS6Q14393 721 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 OR5K2Q8NHB8 316 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 SLCO4A1Q96BD0 722 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 SLC41A3Q96GZ6 507 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 ZNF486Q96H40 463 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-201ENST00000378156 CACNG6Q9BXT2 260 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 ADAMTSL1Q8N6G6 1762 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 SLC33A1O00400 549 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-201ENST00000378156 HSPA12AO43301 675 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 HCKP08631 526 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 PRKCAP17252 672 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 CHMP24386 653 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 IMPA1P29218 277 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 ALDH3B2P48448 385 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 DAPP51397 102 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 HNRNPFP52597 415 aaKnown RBP14.14□□□□□ -0.15
NPHP4-201ENST00000378156 TMEM240Q5SV17 173 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 FAM69BQ5VUD6 431 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 AFMIDQ63HM1 303 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 DEDD2Q8WXF8 326 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 GSKIPQ9P0R6 139 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 TBX21Q9UL17 535 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 CA5BQ9Y2D0 317 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 A0A1W2PPL8 197 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 VSTM2BA6NLU5 285 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 J3KTA2 159 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 SGK494L7N484 410 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 PVRP15151 417 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 PER3P56645 1201 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 MAP4K2Q12851 820 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 RPE65Q16518 533 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 ZNF791Q3KP31 576 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-201ENST00000378156 C6orf132Q5T0Z8 1188 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 C1orf94Q6P1W5 598 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 DIO2Q92813 273 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 TMEM185BQ9H7F4 350 aa14.14□□□□□ -0.15
NPHP4-201ENST00000378156 NPIPA2E9PIF3 369 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 NPIPA3F8WFD2 350 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 GFRA2O00451 464 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 CXCR4P61073 352 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 YPEL5P62699 121 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 TMEM69Q5SWH9 247 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 SLC22A10Q63ZE4 541 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 ZNF565Q8N9K5 539 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 OR4K3Q96R72 315 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 OR1F2PQ96R84 312 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 CNIH4Q9P003 139 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 IL33O95760 270 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 CA5AP35218 305 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 PIGAP37287 484 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 TAP2Q03519 686 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms