RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 LIPKQ5VXJ0 399 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 HCN3Q9P1Z3 774 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 SEC14L4Q9UDX3 406 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 KLF4O43474 513 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 BRINP1O60477 761 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 COQ9O75208 318 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 CBX7O95931 251 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 IFI6P09912 130 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 ENDOUP21128 410 aaKnown RBP18.78■□□□□ 0.6
VSX1-202ENST00000376709 HTR2AP28223 471 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 CD40LGP29965 261 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 OR1Q1Q15612 314 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 DGAT2L6Q6ZPD8 337 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 POGLUT1Q8NBL1 392 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 OR4Q3Q8NH05 313 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 RFKQ969G6 155 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 LAMA1P25391 3075 aa18.77■□□□□ 0.6
VSX1-202ENST00000376709 CDC42EP2O14613 210 aa18.77■□□□□ 0.6
VSX1-202ENST00000376709 SURF4O15260 269 aa18.77■□□□□ 0.6
VSX1-202ENST00000376709 MAP3K8P41279 467 aa18.77■□□□□ 0.6
VSX1-202ENST00000376709 CDH11P55287 796 aa18.77■□□□□ 0.6
VSX1-202ENST00000376709 SKP1P63208 163 aa18.77■□□□□ 0.6
VSX1-202ENST00000376709 PTCRAQ6ISU1 281 aaPredicted RBP18.77■□□□□ 0.6
VSX1-202ENST00000376709 GDPGP1Q6ZNW5 385 aa18.77■□□□□ 0.6
VSX1-202ENST00000376709 OR2T33Q8NG76 320 aa18.77■□□□□ 0.6
VSX1-202ENST00000376709 MRPS18AQ9NVS2 196 aaKnown RBP18.77■□□□□ 0.6
VSX1-202ENST00000376709 STUB1Q9UNE7 303 aa18.77■□□□□ 0.6
VSX1-202ENST00000376709 PEX16Q9Y5Y5 336 aa18.77■□□□□ 0.6
VSX1-202ENST00000376709 CDH10Q9Y6N8 788 aa18.77■□□□□ 0.6
VSX1-202ENST00000376709 USP34Q70CQ2 3546 aa18.77■□□□□ 0.59
VSX1-202ENST00000376709 KDM4EB2RXH2 506 aaPredicted RBP18.76■□□□□ 0.59
VSX1-202ENST00000376709 TAF4O00268 1085 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 WWP2O00308 870 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 SOX1O00570 391 aaPredicted RBP18.76■□□□□ 0.59
VSX1-202ENST00000376709 CDC123O75794 336 aaPredicted RBP18.76■□□□□ 0.59
VSX1-202ENST00000376709 CSF2P04141 144 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 WNT1P04628 370 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 CAPZBP47756 277 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 STX4Q12846 297 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 DNASE1L3Q13609 305 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 PGGHGQ32M88 737 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 FLYWCH1Q4VC44 716 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 TUBA3EQ6PEY2 450 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 PHC2Q8IXK0 858 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 ARL14Q8N4G2 192 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 ARHGEF39Q8N4T4 335 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 ZNF614Q8N883 585 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 HLA-CQ95604 372 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 RBM18Q96H35 190 aaKnown RBP18.76■□□□□ 0.59
VSX1-202ENST00000376709 MAP3K3Q99759 626 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 PRSS27Q9BQR3 290 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 ASPNQ9BXN1 380 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 NUAK2Q9H093 628 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 FGF20Q9NP95 211 aaPredicted RBP18.76■□□□□ 0.59
VSX1-202ENST00000376709 POLE4Q9NR33 117 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 IRAK4Q9NWZ3 460 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 SPTBP11277 2137 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 TMEM131Q92545 1883 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 SRPX2O60687 465 aaPredicted RBP18.76■□□□□ 0.59
VSX1-202ENST00000376709 RNH1P13489 461 aaKnown RBP18.76■□□□□ 0.59
VSX1-202ENST00000376709 MAOBP27338 520 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 CRYBB2P43320 205 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 GCGRP47871 477 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 GAS1P54826 345 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 WNT4P56705 351 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 ZNHIT3Q15649 155 aaPredicted RBP18.76■□□□□ 0.59
VSX1-202ENST00000376709 ZC3H14Q6PJT7 736 aaKnown RBP18.76■□□□□ 0.59
VSX1-202ENST00000376709 HSDL2Q6YN16 418 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 SHFQ7M4L6 423 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 LMX1AQ8TE12 382 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 PMM1Q92871 262 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 RIT1Q92963 219 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 PEX11GQ96HA9 241 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 SAMD8Q96LT4 415 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 SLC38A3Q99624 504 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 DPH1Q9BZG8 443 aa18.76■□□□□ 0.59
VSX1-202ENST00000376709 MRPS33Q9Y291 106 aaKnown RBP18.76■□□□□ 0.59
VSX1-202ENST00000376709 KCNK2O95069 426 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 NKX2-2O95096 273 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 IL9P15248 144 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 CD38P28907 300 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 FASLGP48023 281 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 SRSF5Q13243 272 aaKnown RBP18.75■□□□□ 0.59
VSX1-202ENST00000376709 PRTGQ2VWP7 1150 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.75■□□□□ 0.59
VSX1-202ENST00000376709 OR2G6Q5TZ20 316 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 GKN2Q86XP6 184 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 TMEM239Q8WW34 195 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 TCTN2Q96GX1 697 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 POLE3Q9NRF9 147 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 MED17Q9NVC6 651 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 KLHL3Q9UH77 587 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 SSR3Q9UNL2 185 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 SPIN1Q9Y657 262 aaPredicted RBP18.75■□□□□ 0.59
VSX1-202ENST00000376709 TMEM129A0AVI4 362 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 PROS1P07225 676 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 TSPAN19P0C672 248 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 NME1P15531 152 aaKnown RBP18.75■□□□□ 0.59
VSX1-202ENST00000376709 TGM1P22735 817 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 CD27P26842 260 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms